Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.39□□□□□ -0.11
GRIA1P42261 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.39□□□□□ -0.11
GRIA1P42261 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 AL591846.1-201ENST00000451736 433 ntBASIC14.39□□□□□ -0.11
GRIA1P42261 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GRIA1P42261 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.39□□□□□ -0.11
GRIA1P42261 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.39□□□□□ -0.11
GRIA1P42261 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.39□□□□□ -0.11
GRIA1P42261 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.39□□□□□ -0.11
GRIA1P42261 SNORD3B-2-202ENST00000571722 791 ntBASIC14.39□□□□□ -0.11
GRIA1P42261 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.39□□□□□ -0.11
GRIA1P42261 AC104982.3-201ENST00000581995 514 ntBASIC14.39□□□□□ -0.11
GRIA1P42261 AL023803.2-201ENST00000620080 638 ntBASIC14.39□□□□□ -0.11
GRIA1P42261 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.39□□□□□ -0.11
GRIA1P42261 AC004923.1-202ENST00000642106 209 ntBASIC14.39□□□□□ -0.11
GRIA1P42261 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GRIA1P42261 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.39□□□□□ -0.11
GRIA1P42261 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.39□□□□□ -0.11
GRIA1P42261 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 SALL4P6-201ENST00000429385 1691 ntBASIC14.39□□□□□ -0.11
GRIA1P42261 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GRIA1P42261 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GRIA1P42261 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GRIA1P42261 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.38□□□□□ -0.11
GRIA1P42261 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.38□□□□□ -0.11
GRIA1P42261 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.38□□□□□ -0.11
GRIA1P42261 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.38□□□□□ -0.11
GRIA1P42261 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GRIA1P42261 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.38□□□□□ -0.11
GRIA1P42261 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.38□□□□□ -0.11
GRIA1P42261 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.38□□□□□ -0.11
GRIA1P42261 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.38□□□□□ -0.11
GRIA1P42261 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.38□□□□□ -0.11
GRIA1P42261 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
GRIA1P42261 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.38□□□□□ -0.11
GRIA1P42261 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.38□□□□□ -0.11
GRIA1P42261 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GRIA1P42261 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.38□□□□□ -0.11
GRIA1P42261 AC007663.3-201ENST00000609632 465 ntBASIC14.38□□□□□ -0.11
GRIA1P42261 AC090164.2-201ENST00000611487 516 ntBASIC14.38□□□□□ -0.11
GRIA1P42261 CR392039.2-201ENST00000623182 509 ntBASIC14.38□□□□□ -0.11
GRIA1P42261 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GRIA1P42261 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 AL590824.1-201ENST00000403828 1349 ntBASIC14.38□□□□□ -0.11
GRIA1P42261 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.38□□□□□ -0.11
GRIA1P42261 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GRIA1P42261 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GRIA1P42261 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GRIA1P42261 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GRIA1P42261 AL359845.1-201ENST00000458202 1648 ntBASIC14.37□□□□□ -0.11
GRIA1P42261 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GRIA1P42261 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GRIA1P42261 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms