Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NFKB1P19838 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NFKB1P19838 AC068760.1-201ENST00000493579 1953 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
NFKB1P19838 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.44□□□□□ -0.1
NFKB1P19838 RNA5SP359-201ENST00000364838 113 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.44□□□□□ -0.1
NFKB1P19838 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NFKB1P19838 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 RPS9P1-201ENST00000419943 583 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 EIF4HP1-201ENST00000453115 687 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.44□□□□□ -0.1
NFKB1P19838 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.44□□□□□ -0.1
NFKB1P19838 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.44□□□□□ -0.1
NFKB1P19838 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.44□□□□□ -0.1
NFKB1P19838 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.44□□□□□ -0.1
NFKB1P19838 AL022328.3-201ENST00000607943 679 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 AC126335.2-201ENST00000623362 4637 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.44□□□□□ -0.1
NFKB1P19838 AC005014.1-201ENST00000432006 2976 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.44□□□□□ -0.1
NFKB1P19838 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 PTENP1-202ENST00000532280 3996 ntBASIC14.44□□□□□ -0.1
NFKB1P19838 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NFKB1P19838 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.44□□□□□ -0.1
NFKB1P19838 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NFKB1P19838 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.44□□□□□ -0.1
NFKB1P19838 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.43□□□□□ -0.1
NFKB1P19838 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.43□□□□□ -0.1
NFKB1P19838 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.43□□□□□ -0.1
NFKB1P19838 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.43□□□□□ -0.1
NFKB1P19838 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.43□□□□□ -0.1
NFKB1P19838 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 AC011742.3-201ENST00000439053 820 ntBASIC14.43□□□□□ -0.1
NFKB1P19838 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 GOLGA2P8-201ENST00000505201 779 ntBASIC14.43□□□□□ -0.1
NFKB1P19838 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
NFKB1P19838 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.43□□□□□ -0.1
NFKB1P19838 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.43□□□□□ -0.1
NFKB1P19838 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.43□□□□□ -0.1
NFKB1P19838 AC132872.1-201ENST00000566986 1195 ntBASIC14.43□□□□□ -0.1
NFKB1P19838 RN7SL371P-201ENST00000578099 267 ntBASIC14.43□□□□□ -0.1
NFKB1P19838 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.43□□□□□ -0.1
NFKB1P19838 MIR3188-201ENST00000583494 85 ntBASIC14.43□□□□□ -0.1
NFKB1P19838 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
NFKB1P19838 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.43□□□□□ -0.1
NFKB1P19838 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.43□□□□□ -0.1
NFKB1P19838 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms