Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TOP2AP11388 TLE2-205ENST00000586422 389 ntTSL 5 BASIC23.83■■□□□ 1.41
TOP2AP11388 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
TOP2AP11388 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC23.83■■□□□ 1.4
TOP2AP11388 AL157996.1-201ENST00000624684 2299 ntBASIC23.83■■□□□ 1.4
TOP2AP11388 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
TOP2AP11388 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
TOP2AP11388 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TOP2AP11388 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
TOP2AP11388 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TOP2AP11388 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC23.82■■□□□ 1.4
TOP2AP11388 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC23.82■■□□□ 1.4
TOP2AP11388 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TOP2AP11388 POP5-201ENST00000341039 913 ntTSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 PMF1-201ENST00000368273 884 ntTSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 TUBB2BP1-201ENST00000404155 871 ntBASIC23.82■■□□□ 1.4
TOP2AP11388 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 BICD1P1-201ENST00000457832 1222 ntBASIC23.82■■□□□ 1.4
TOP2AP11388 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 MST1P2-201ENST00000457982 2291 ntBASIC23.82■■□□□ 1.4
TOP2AP11388 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC23.82■■□□□ 1.4
TOP2AP11388 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TOP2AP11388 MARK2P9-201ENST00000430958 1727 ntBASIC23.82■■□□□ 1.4
TOP2AP11388 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TOP2AP11388 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TOP2AP11388 RER1-203ENST00000378513 3000 ntTSL 3 BASIC23.81■■□□□ 1.4
TOP2AP11388 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TOP2AP11388 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
TOP2AP11388 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC23.81■■□□□ 1.4
TOP2AP11388 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TOP2AP11388 ZSCAN5DP-201ENST00000600684 1488 ntBASIC23.81■■□□□ 1.4
TOP2AP11388 ATF4P4-201ENST00000393544 1930 ntBASIC23.81■■□□□ 1.4
TOP2AP11388 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TOP2AP11388 SNX15-201ENST00000352068 771 ntTSL 5 BASIC23.81■■□□□ 1.4
TOP2AP11388 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 AL356000.1-201ENST00000441073 1238 ntBASIC23.81■■□□□ 1.4
TOP2AP11388 UGT1A12P-201ENST00000447084 853 ntBASIC23.81■■□□□ 1.4
TOP2AP11388 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC23.81■■□□□ 1.4
TOP2AP11388 RN7SL646P-201ENST00000492969 297 ntBASIC23.81■■□□□ 1.4
TOP2AP11388 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC23.81■■□□□ 1.4
TOP2AP11388 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC23.81■■□□□ 1.4
TOP2AP11388 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 AC133555.4-201ENST00000569081 152 ntBASIC23.81■■□□□ 1.4
TOP2AP11388 PCTP-206ENST00000573500 919 ntTSL 3 BASIC23.81■■□□□ 1.4
TOP2AP11388 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC23.81■■□□□ 1.4
TOP2AP11388 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC23.81■■□□□ 1.4
TOP2AP11388 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC23.81■■□□□ 1.4
TOP2AP11388 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TOP2AP11388 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
TOP2AP11388 AC002350.2-201ENST00000623894 1828 ntBASIC23.81■■□□□ 1.4
TOP2AP11388 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
TOP2AP11388 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TOP2AP11388 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC23.81■■□□□ 1.4
TOP2AP11388 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TOP2AP11388 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TOP2AP11388 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TOP2AP11388 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TOP2AP11388 KRT8P6-201ENST00000399259 1207 ntBASIC23.8■■□□□ 1.4
TOP2AP11388 MARCKSL1P2-201ENST00000401037 976 ntBASIC23.8■■□□□ 1.4
TOP2AP11388 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC23.8■■□□□ 1.4
TOP2AP11388 DUX4L31-201ENST00000446466 1136 ntBASIC23.8■■□□□ 1.4
TOP2AP11388 TULP3P1-202ENST00000453253 1291 ntBASIC23.8■■□□□ 1.4
TOP2AP11388 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC23.8■■□□□ 1.4
TOP2AP11388 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC23.8■■□□□ 1.4
TOP2AP11388 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC23.8■■□□□ 1.4
TOP2AP11388 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TOP2AP11388 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TOP2AP11388 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TOP2AP11388 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TOP2AP11388 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC23.8■■□□□ 1.4
TOP2AP11388 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms