Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CYP3A4P08684 Z69890.1-201ENST00000382990 339 ntBASIC15.79■□□□□ 0.12
CYP3A4P08684 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.79■□□□□ 0.12
CYP3A4P08684 RN7SKP109-201ENST00000410592 316 ntBASIC15.79■□□□□ 0.12
CYP3A4P08684 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.79■□□□□ 0.12
CYP3A4P08684 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.79■□□□□ 0.12
CYP3A4P08684 DPY19L2P5-201ENST00000456300 331 ntBASIC15.79■□□□□ 0.12
CYP3A4P08684 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.79■□□□□ 0.12
CYP3A4P08684 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.79■□□□□ 0.12
CYP3A4P08684 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CYP3A4P08684 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CYP3A4P08684 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.79■□□□□ 0.12
CYP3A4P08684 AC107464.3-201ENST00000609172 737 ntBASIC15.79■□□□□ 0.12
CYP3A4P08684 LINC00244-201ENST00000625073 613 ntBASIC15.79■□□□□ 0.12
CYP3A4P08684 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.79■□□□□ 0.12
CYP3A4P08684 AC011491.1-203ENST00000637688 543 ntBASIC15.79■□□□□ 0.12
CYP3A4P08684 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CYP3A4P08684 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.79■□□□□ 0.12
CYP3A4P08684 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.79■□□□□ 0.12
CYP3A4P08684 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CYP3A4P08684 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CYP3A4P08684 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CYP3A4P08684 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 AF013593.1-201ENST00000458074 1487 ntBASIC15.78■□□□□ 0.12
CYP3A4P08684 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 MARK2P9-201ENST00000430958 1727 ntBASIC15.78■□□□□ 0.12
CYP3A4P08684 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CYP3A4P08684 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 MIR1307-201ENST00000408840 149 ntBASIC15.78■□□□□ 0.12
CYP3A4P08684 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.78■□□□□ 0.12
CYP3A4P08684 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.78■□□□□ 0.12
CYP3A4P08684 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.78■□□□□ 0.12
CYP3A4P08684 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CYP3A4P08684 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.78■□□□□ 0.12
CYP3A4P08684 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CYP3A4P08684 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CYP3A4P08684 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.78■□□□□ 0.12
CYP3A4P08684 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CYP3A4P08684 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.78■□□□□ 0.12
CYP3A4P08684 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CYP3A4P08684 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CYP3A4P08684 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CYP3A4P08684 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CYP3A4P08684 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CYP3A4P08684 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.77■□□□□ 0.12
CYP3A4P08684 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CYP3A4P08684 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.77■□□□□ 0.12
CYP3A4P08684 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms