Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.15■□□□□ 0.34
CSF1RP07333 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CSF1RP07333 RCC2P5-201ENST00000492126 1487 ntBASIC17.15■□□□□ 0.34
CSF1RP07333 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CSF1RP07333 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC17.15■□□□□ 0.34
CSF1RP07333 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.15■□□□□ 0.34
CSF1RP07333 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.15■□□□□ 0.34
CSF1RP07333 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CSF1RP07333 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CSF1RP07333 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSF1RP07333 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.15■□□□□ 0.34
CSF1RP07333 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.14■□□□□ 0.34
CSF1RP07333 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CSF1RP07333 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CSF1RP07333 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.14■□□□□ 0.33
CSF1RP07333 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CSF1RP07333 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.14■□□□□ 0.33
CSF1RP07333 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC17.14■□□□□ 0.33
CSF1RP07333 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.14■□□□□ 0.33
CSF1RP07333 AC079250.1-201ENST00000456046 531 ntBASIC17.14■□□□□ 0.33
CSF1RP07333 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.14■□□□□ 0.33
CSF1RP07333 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CSF1RP07333 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.14■□□□□ 0.33
CSF1RP07333 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC17.14■□□□□ 0.33
CSF1RP07333 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC17.14■□□□□ 0.33
CSF1RP07333 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CSF1RP07333 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.14■□□□□ 0.33
CSF1RP07333 AC005777.1-201ENST00000588332 187 ntBASIC17.14■□□□□ 0.33
CSF1RP07333 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.14■□□□□ 0.33
CSF1RP07333 AC073869.4-201ENST00000620841 800 ntBASIC17.14■□□□□ 0.33
CSF1RP07333 AC126755.5-201ENST00000622756 267 ntBASIC17.14■□□□□ 0.33
CSF1RP07333 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.14■□□□□ 0.33
CSF1RP07333 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CSF1RP07333 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC17.14■□□□□ 0.33
CSF1RP07333 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CSF1RP07333 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.14■□□□□ 0.33
CSF1RP07333 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.14■□□□□ 0.33
CSF1RP07333 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CSF1RP07333 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSF1RP07333 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.14■□□□□ 0.33
CSF1RP07333 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CSF1RP07333 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC17.13■□□□□ 0.33
CSF1RP07333 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CSF1RP07333 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CSF1RP07333 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.13■□□□□ 0.33
CSF1RP07333 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC17.13■□□□□ 0.33
CSF1RP07333 SNORA50C-201ENST00000408535 133 ntBASIC17.13■□□□□ 0.33
CSF1RP07333 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.13■□□□□ 0.33
CSF1RP07333 GULOP-201ENST00000454030 748 ntBASIC17.13■□□□□ 0.33
CSF1RP07333 BAK1P2-201ENST00000532665 631 ntBASIC17.13■□□□□ 0.33
CSF1RP07333 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.13■□□□□ 0.33
CSF1RP07333 AC011247.3-201ENST00000603297 438 ntBASIC17.13■□□□□ 0.33
CSF1RP07333 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.13■□□□□ 0.33
CSF1RP07333 SNORA50.1-201ENST00000628590 135 ntBASIC17.13■□□□□ 0.33
CSF1RP07333 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSF1RP07333 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.13■□□□□ 0.33
CSF1RP07333 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CSF1RP07333 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CSF1RP07333 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.13■□□□□ 0.33
CSF1RP07333 FAM90A21P-201ENST00000510875 1396 ntBASIC17.13■□□□□ 0.33
CSF1RP07333 FAM90A15P-201ENST00000514465 1395 ntBASIC17.13■□□□□ 0.33
CSF1RP07333 FAM90A6P-201ENST00000515148 1394 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms