Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 MIR326-201ENST00000362220 95 ntBASIC12.67□□□□□ -0.38
APOC1P02654 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.67□□□□□ -0.38
APOC1P02654 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.67□□□□□ -0.38
APOC1P02654 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.67□□□□□ -0.38
APOC1P02654 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 NME2P1-201ENST00000426182 414 ntBASIC12.67□□□□□ -0.38
APOC1P02654 RPL7P3-201ENST00000441388 714 ntBASIC12.67□□□□□ -0.38
APOC1P02654 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.67□□□□□ -0.38
APOC1P02654 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 DUX4L46-201ENST00000566845 751 ntBASIC12.67□□□□□ -0.38
APOC1P02654 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.67□□□□□ -0.38
APOC1P02654 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
APOC1P02654 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
APOC1P02654 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.67□□□□□ -0.38
APOC1P02654 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC1P02654 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC1P02654 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
APOC1P02654 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
APOC1P02654 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
APOC1P02654 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
APOC1P02654 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 COX5BP8-201ENST00000416911 349 ntBASIC12.66□□□□□ -0.38
APOC1P02654 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 CNN2P10-201ENST00000443067 918 ntBASIC12.66□□□□□ -0.38
APOC1P02654 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.66□□□□□ -0.38
APOC1P02654 AP005018.1-201ENST00000525475 301 ntBASIC12.66□□□□□ -0.38
APOC1P02654 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 AC106886.1-201ENST00000568660 600 ntBASIC12.66□□□□□ -0.38
APOC1P02654 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.66□□□□□ -0.38
APOC1P02654 AC132192.2-201ENST00000596206 1147 ntBASIC12.66□□□□□ -0.38
APOC1P02654 AC009884.2-201ENST00000603110 324 ntBASIC12.66□□□□□ -0.38
APOC1P02654 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
APOC1P02654 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 IGHV3-72-202ENST00000621503 303 ntBASIC12.66□□□□□ -0.38
APOC1P02654 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.66□□□□□ -0.38
APOC1P02654 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.66□□□□□ -0.38
APOC1P02654 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.66□□□□□ -0.38
APOC1P02654 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.66□□□□□ -0.38
APOC1P02654 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
APOC1P02654 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC1P02654 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC1P02654 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms