Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ELK2AP-201ENST00000392510 1007 ntBASIC14.29□□□□□ -0.12
RFPL1O75677 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RFPL1O75677 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.29□□□□□ -0.12
RFPL1O75677 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.29□□□□□ -0.12
RFPL1O75677 AKR7A2P1-201ENST00000460134 915 ntBASIC14.29□□□□□ -0.12
RFPL1O75677 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.29□□□□□ -0.12
RFPL1O75677 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.29□□□□□ -0.12
RFPL1O75677 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RFPL1O75677 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.29□□□□□ -0.12
RFPL1O75677 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.29□□□□□ -0.12
RFPL1O75677 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.29□□□□□ -0.12
RFPL1O75677 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.29□□□□□ -0.12
RFPL1O75677 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.29□□□□□ -0.12
RFPL1O75677 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.29□□□□□ -0.12
RFPL1O75677 CR392039.2-201ENST00000623182 509 ntBASIC14.29□□□□□ -0.12
RFPL1O75677 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.29□□□□□ -0.12
RFPL1O75677 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFPL1O75677 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFPL1O75677 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFPL1O75677 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
RFPL1O75677 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFPL1O75677 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFPL1O75677 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RFPL1O75677 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFPL1O75677 LAP3P2-201ENST00000454686 1454 ntBASIC14.29□□□□□ -0.12
RFPL1O75677 AL354989.2-201ENST00000435838 1540 ntBASIC14.29□□□□□ -0.12
RFPL1O75677 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.29□□□□□ -0.12
RFPL1O75677 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.29□□□□□ -0.12
RFPL1O75677 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFPL1O75677 AL445209.1-201ENST00000607269 3491 ntBASIC14.29□□□□□ -0.12
RFPL1O75677 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.29□□□□□ -0.12
RFPL1O75677 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFPL1O75677 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RFPL1O75677 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
RFPL1O75677 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFPL1O75677 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RFPL1O75677 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.28□□□□□ -0.12
RFPL1O75677 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
RFPL1O75677 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.28□□□□□ -0.12
RFPL1O75677 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 SHC1P1-201ENST00000425230 1745 ntBASIC14.28□□□□□ -0.12
RFPL1O75677 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RFPL1O75677 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.28□□□□□ -0.12
RFPL1O75677 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.28□□□□□ -0.12
RFPL1O75677 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.28□□□□□ -0.12
RFPL1O75677 AL645933.1-201ENST00000440087 609 ntBASIC14.28□□□□□ -0.12
RFPL1O75677 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.28□□□□□ -0.12
RFPL1O75677 CHMP1AP1-201ENST00000445563 662 ntBASIC14.28□□□□□ -0.12
RFPL1O75677 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.28□□□□□ -0.12
RFPL1O75677 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.28□□□□□ -0.12
RFPL1O75677 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.28□□□□□ -0.12
RFPL1O75677 RNA5SP423-201ENST00000517127 109 ntBASIC14.28□□□□□ -0.12
RFPL1O75677 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.28□□□□□ -0.12
RFPL1O75677 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.28□□□□□ -0.12
RFPL1O75677 RN7SL190P-201ENST00000582519 257 ntBASIC14.28□□□□□ -0.12
RFPL1O75677 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.28□□□□□ -0.12
RFPL1O75677 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.28□□□□□ -0.12
RFPL1O75677 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 AL008718.2-201ENST00000609206 1313 ntBASIC14.28□□□□□ -0.12
RFPL1O75677 AL021578.1-201ENST00000613646 709 ntBASIC14.28□□□□□ -0.12
RFPL1O75677 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.28□□□□□ -0.12
RFPL1O75677 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFPL1O75677 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFPL1O75677 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFPL1O75677 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFPL1O75677 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RFPL1O75677 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.27□□□□□ -0.12
RFPL1O75677 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFPL1O75677 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.27□□□□□ -0.12
RFPL1O75677 PCDHA6-201ENST00000378126 3267 ntBASIC14.27□□□□□ -0.12
RFPL1O75677 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFPL1O75677 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFPL1O75677 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RFPL1O75677 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.27□□□□□ -0.12
RFPL1O75677 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFPL1O75677 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFPL1O75677 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFPL1O75677 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.27□□□□□ -0.13
RFPL1O75677 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RFPL1O75677 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.27□□□□□ -0.13
RFPL1O75677 RPSAP36-202ENST00000494591 1261 ntBASIC14.27□□□□□ -0.13
RFPL1O75677 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.27□□□□□ -0.13
RFPL1O75677 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.27□□□□□ -0.13
RFPL1O75677 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RFPL1O75677 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms