Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AL807761.2-201ENST00000422849 729 ntBASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AC098935.1-201ENST00000446057 611 ntBASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 DUTP3-201ENST00000450025 415 ntBASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 RN7SL181P-201ENST00000462921 277 ntBASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AC093752.3-201ENST00000567343 901 ntBASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AL022334.2-201ENST00000610000 484 ntBASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 MIR6727-201ENST00000620702 65 ntBASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AL591471.1-201ENST00000621855 229 ntBASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 STRCP1-201ENST00000509801 5328 ntBASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA2E9PIF3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 AC027601.5-201ENST00000624065 2482 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 SNX18-202ENST00000343017 3140 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 AL512430.1-201ENST00000392575 860 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 RPS9P1-201ENST00000419943 583 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms