Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.89■□□□□ 0.13
COL4A3BPQ9Y5P4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL4A3BPQ9Y5P4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL4A3BPQ9Y5P4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL4A3BPQ9Y5P4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL4A3BPQ9Y5P4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL4A3BPQ9Y5P4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL4A3BPQ9Y5P4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL4A3BPQ9Y5P4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL4A3BPQ9Y5P4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 AC130686.1-201ENST00000622936 2466 ntBASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 AC091046.1-201ENST00000331871 207 ntBASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 BANF1P3-201ENST00000412556 261 ntBASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 MAGEA5-201ENST00000446757 942 ntBASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 AC093752.3-201ENST00000567343 901 ntBASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 BAP1-211ENST00000615113 489 ntBASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 AC111170.3-201ENST00000624282 2464 ntBASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL4A3BPQ9Y5P4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 CAP2P1-201ENST00000557743 1390 ntBASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COL4A3BPQ9Y5P4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms