Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 OR8T1P-201ENST00000421347 918 ntBASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 FGFR3P1-201ENST00000449999 601 ntBASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 KRT8P1-201ENST00000557533 1207 ntBASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 MIR6756-201ENST00000616240 63 ntBASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI2Q9Y5P3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 KRT17P5-201ENST00000332088 839 ntBASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 PDIA3P2-201ENST00000428073 158 ntBASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 AC098935.1-201ENST00000446057 611 ntBASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms