Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 RN7SL8P-201ENST00000461771 266 ntBASIC13.07□□□□□ -0.32
LRFN1Q9P244 ORAOV1P1-201ENST00000503108 395 ntBASIC13.07□□□□□ -0.32
LRFN1Q9P244 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 RN7SL555P-201ENST00000584742 339 ntBASIC13.07□□□□□ -0.32
LRFN1Q9P244 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 YRDCP1-201ENST00000621419 643 ntBASIC13.07□□□□□ -0.32
LRFN1Q9P244 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRFN1Q9P244 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.07□□□□□ -0.32
LRFN1Q9P244 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 AL591122.2-201ENST00000624125 1853 ntBASIC13.06□□□□□ -0.32
LRFN1Q9P244 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 RPSAP31-201ENST00000416648 895 ntBASIC13.06□□□□□ -0.32
LRFN1Q9P244 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 MRPL22P1-201ENST00000505398 616 ntBASIC13.06□□□□□ -0.32
LRFN1Q9P244 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 AL512310.5-201ENST00000551999 515 ntBASIC13.06□□□□□ -0.32
LRFN1Q9P244 NPM1P43-201ENST00000558669 786 ntBASIC13.06□□□□□ -0.32
LRFN1Q9P244 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 AC232323.1-201ENST00000540724 2099 ntBASIC13.06□□□□□ -0.32
LRFN1Q9P244 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.06□□□□□ -0.32
LRFN1Q9P244 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRFN1Q9P244 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms