Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.15■□□□□ 0.34
RPAP1Q9BWH6 AP000911.2-201ENST00000534330 502 ntBASIC17.15■□□□□ 0.34
RPAP1Q9BWH6 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.15■□□□□ 0.34
RPAP1Q9BWH6 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.15■□□□□ 0.34
RPAP1Q9BWH6 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.15■□□□□ 0.34
RPAP1Q9BWH6 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPAP1Q9BWH6 AC107464.3-201ENST00000609172 737 ntBASIC17.15■□□□□ 0.34
RPAP1Q9BWH6 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPAP1Q9BWH6 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.14■□□□□ 0.34
RPAP1Q9BWH6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
RPAP1Q9BWH6 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.14■□□□□ 0.34
RPAP1Q9BWH6 PPT1-213ENST00000641319 2388 ntBASIC17.14■□□□□ 0.34
RPAP1Q9BWH6 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RPAP1Q9BWH6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RPAP1Q9BWH6 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 SHMT1P1-201ENST00000419974 1312 ntBASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 AC007952.5-201ENST00000572818 1486 ntBASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 MIR645-201ENST00000385283 94 ntBASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 AL161773.1-201ENST00000624845 863 ntBASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.14■□□□□ 0.33
RPAP1Q9BWH6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 HLA-DMA-203ENST00000395305 777 ntBASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 GUSBP10-201ENST00000417412 665 ntBASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 AC097065.1-201ENST00000425737 517 ntBASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 AL512310.5-201ENST00000551999 515 ntBASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 AC138701.2-201ENST00000553634 226 ntBASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 AC009084.3-201ENST00000623356 437 ntBASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPAP1Q9BWH6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPAP1Q9BWH6 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms