Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 KRT17P5-201ENST00000332088 839 ntBASIC12.8□□□□□ -0.36
PHF3Q92576 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PHF3Q92576 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.8□□□□□ -0.36
PHF3Q92576 AL357563.1-201ENST00000404728 395 ntBASIC12.8□□□□□ -0.36
PHF3Q92576 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 OR8T1P-201ENST00000421347 918 ntBASIC12.8□□□□□ -0.36
PHF3Q92576 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.8□□□□□ -0.36
PHF3Q92576 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.8□□□□□ -0.36
PHF3Q92576 MIR2392-201ENST00000584881 84 ntBASIC12.8□□□□□ -0.36
PHF3Q92576 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.8□□□□□ -0.36
PHF3Q92576 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
PHF3Q92576 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.8□□□□□ -0.36
PHF3Q92576 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PHF3Q92576 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.8□□□□□ -0.36
PHF3Q92576 TCAM1P-207ENST00000485295 1537 ntBASIC12.8□□□□□ -0.36
PHF3Q92576 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.8□□□□□ -0.36
PHF3Q92576 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PHF3Q92576 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PHF3Q92576 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.79□□□□□ -0.36
PHF3Q92576 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.79□□□□□ -0.36
PHF3Q92576 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.79□□□□□ -0.36
PHF3Q92576 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.79□□□□□ -0.36
PHF3Q92576 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.79□□□□□ -0.36
PHF3Q92576 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.79□□□□□ -0.36
PHF3Q92576 HLA-DMA-203ENST00000395305 777 ntBASIC12.79□□□□□ -0.36
PHF3Q92576 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.79□□□□□ -0.36
PHF3Q92576 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PHF3Q92576 CR383656.3-201ENST00000551315 183 ntBASIC12.79□□□□□ -0.36
PHF3Q92576 AC138701.2-201ENST00000553634 226 ntBASIC12.79□□□□□ -0.36
PHF3Q92576 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.79□□□□□ -0.36
PHF3Q92576 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PHF3Q92576 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.79□□□□□ -0.36
PHF3Q92576 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.79□□□□□ -0.36
PHF3Q92576 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PHF3Q92576 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 AL591122.2-201ENST00000624125 1853 ntBASIC12.79□□□□□ -0.36
PHF3Q92576 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.79□□□□□ -0.36
PHF3Q92576 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.79□□□□□ -0.36
PHF3Q92576 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.79□□□□□ -0.36
PHF3Q92576 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
PHF3Q92576 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.79□□□□□ -0.36
PHF3Q92576 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.79□□□□□ -0.36
PHF3Q92576 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.79□□□□□ -0.36
PHF3Q92576 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.79□□□□□ -0.36
PHF3Q92576 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 ALG1L13P-202ENST00000519320 584 ntBASIC12.79□□□□□ -0.36
PHF3Q92576 AC021016.3-201ENST00000608367 477 ntBASIC12.79□□□□□ -0.36
PHF3Q92576 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PHF3Q92576 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
PHF3Q92576 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PHF3Q92576 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.79□□□□□ -0.36
PHF3Q92576 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.78□□□□□ -0.36
PHF3Q92576 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 FAM90A12P-201ENST00000519497 2375 ntBASIC12.78□□□□□ -0.36
PHF3Q92576 FAM90A24P-201ENST00000520792 2369 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms