Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 SERPINA13P-202ENST00000478994 924 ntBASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AC005740.2-201ENST00000511085 419 ntBASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NUP43Q8NFH3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 BRWD1P1-201ENST00000401091 371 ntBASIC13.31□□□□□ -0.28
NUP43Q8NFH3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 AC126915.1-201ENST00000522847 1038 ntBASIC13.31□□□□□ -0.28
NUP43Q8NFH3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 AC009779.1-201ENST00000551138 283 ntBASIC13.31□□□□□ -0.28
NUP43Q8NFH3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 AC105206.1-202ENST00000314927 2368 ntBASIC13.31□□□□□ -0.28
NUP43Q8NFH3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NUP43Q8NFH3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 RCC2P1-201ENST00000452257 1476 ntBASIC13.3□□□□□ -0.28
NUP43Q8NFH3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 PCDHA5-203ENST00000614258 4248 ntBASIC13.3□□□□□ -0.28
NUP43Q8NFH3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NUP43Q8NFH3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms