Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 CICP8-201ENST00000455800 2813 ntBASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 NCLP1-201ENST00000445357 1963 ntBASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 FAM58BP-201ENST00000439056 645 ntBASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 AC022217.1-201ENST00000521069 738 ntBASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 AC005730.2-201ENST00000564549 1184 ntBASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 AC008805.1-201ENST00000590892 364 ntBASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 AL122018.1-201ENST00000446607 2310 ntBASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00346Q8IVM7 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms