Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RPS2P32-201ENST00000439199 892 ntBASIC12.74□□□□□ -0.37
LRRC28Q86X40 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 KRT90P-201ENST00000549264 1064 ntBASIC12.74□□□□□ -0.37
LRRC28Q86X40 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 SORD2P-201ENST00000558556 1069 ntBASIC12.74□□□□□ -0.37
LRRC28Q86X40 DUX4L47-201ENST00000566374 394 ntBASIC12.74□□□□□ -0.37
LRRC28Q86X40 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 RN7SL48P-201ENST00000579283 293 ntBASIC12.74□□□□□ -0.37
LRRC28Q86X40 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.74□□□□□ -0.37
LRRC28Q86X40 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 AL355102.3-201ENST00000554299 1678 ntBASIC12.73□□□□□ -0.37
LRRC28Q86X40 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 Z98257.2-202ENST00000641138 1548 ntBASIC12.73□□□□□ -0.37
LRRC28Q86X40 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 CSF2RBP1-201ENST00000447905 391 ntBASIC12.73□□□□□ -0.37
LRRC28Q86X40 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 RNA5SP486-201ENST00000515961 83 ntBASIC12.73□□□□□ -0.37
LRRC28Q86X40 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRC28Q86X40 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRC28Q86X40 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 AC125807.2-201ENST00000513358 3514 ntBASIC12.72□□□□□ -0.37
LRRC28Q86X40 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRC28Q86X40 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LRRC28Q86X40 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms