Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 AC008620.2-201ENST00000510294 1569 ntBASIC13.51□□□□□ -0.25
RIF1Q5UIP0 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 MIR1307-201ENST00000408840 149 ntBASIC13.51□□□□□ -0.25
RIF1Q5UIP0 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 RPSAP16-201ENST00000447583 821 ntBASIC13.51□□□□□ -0.25
RIF1Q5UIP0 GULOP-201ENST00000454030 748 ntBASIC13.51□□□□□ -0.25
RIF1Q5UIP0 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 FTH1-205ENST00000529631 507 ntTSL 4 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 AL136298.3-201ENST00000556746 445 ntBASIC13.51□□□□□ -0.25
RIF1Q5UIP0 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 AC005332.2-201ENST00000590010 930 ntBASIC13.51□□□□□ -0.25
RIF1Q5UIP0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 MIR602-201ENST00000384960 98 ntBASIC13.5□□□□□ -0.25
RIF1Q5UIP0 AL391903.1-201ENST00000407513 365 ntBASIC13.5□□□□□ -0.25
RIF1Q5UIP0 AL121994.1-201ENST00000413189 402 ntBASIC13.5□□□□□ -0.25
RIF1Q5UIP0 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 HNRNPA1P7-201ENST00000521273 963 ntBASIC13.5□□□□□ -0.25
RIF1Q5UIP0 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 AC133555.4-201ENST00000569081 152 ntBASIC13.5□□□□□ -0.25
RIF1Q5UIP0 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 MGST3-204ENST00000367888 778 ntTSL 3 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 DDX11L8-201ENST00000535849 366 ntBASIC13.5□□□□□ -0.25
RIF1Q5UIP0 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 SNX20-205ENST00000610485 557 ntTSL 5 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RIF1Q5UIP0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 SALL4P6-201ENST00000429385 1691 ntBASIC13.49□□□□□ -0.25
RIF1Q5UIP0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 RN7SL76P-201ENST00000482435 289 ntBASIC13.49□□□□□ -0.25
RIF1Q5UIP0 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AC090616.6-202ENST00000583601 1088 ntBASIC13.49□□□□□ -0.25
RIF1Q5UIP0 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 MIR941-1-201ENST00000636396 72 ntBASIC13.49□□□□□ -0.25
RIF1Q5UIP0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AC011477.7-201ENST00000617163 1440 ntBASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AC015656.1-201ENST00000624209 3578 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms