Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 HMGB1P24-201ENST00000611897 328 ntBASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 AL590824.1-201ENST00000403828 1349 ntBASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SHROOM1Q2M3G4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 LINC01230-201ENST00000625222 3017 ntBASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.36■□□□□ 0.21
SHROOM1Q2M3G4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 STX3-207ENST00000633708 3111 ntTSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 AC016397.2-201ENST00000624848 1985 ntBASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 AC073210.1-201ENST00000414799 232 ntBASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 AC093300.1-201ENST00000510368 1201 ntBASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SHROOM1Q2M3G4 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms