Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MIR4472-1-201ENST00000584349 80 ntBASIC16.61■□□□□ 0.25
IRX3P78415 AC005357.2-202ENST00000590507 1060 ntBASIC16.61■□□□□ 0.25
IRX3P78415 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.61■□□□□ 0.25
IRX3P78415 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 AC140113.1-201ENST00000603467 169 ntBASIC16.61■□□□□ 0.25
IRX3P78415 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 AGGF1P1-201ENST00000509500 2073 ntBASIC16.61■□□□□ 0.25
IRX3P78415 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.61■□□□□ 0.25
IRX3P78415 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX3P78415 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.6■□□□□ 0.25
IRX3P78415 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX3P78415 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.6■□□□□ 0.25
IRX3P78415 MYO15B-237ENST00000642007 4893 ntBASIC16.6■□□□□ 0.25
IRX3P78415 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.6■□□□□ 0.25
IRX3P78415 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX3P78415 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX3P78415 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.6■□□□□ 0.25
IRX3P78415 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.6■□□□□ 0.25
IRX3P78415 LINC00634-202ENST00000505157 222 ntBASIC16.6■□□□□ 0.25
IRX3P78415 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX3P78415 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.6■□□□□ 0.25
IRX3P78415 C2orf69P1-201ENST00000563532 1093 ntBASIC16.6■□□□□ 0.25
IRX3P78415 AC141586.1-203ENST00000567242 366 ntBASIC16.6■□□□□ 0.25
IRX3P78415 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
IRX3P78415 RN7SL357P-201ENST00000581065 298 ntBASIC16.6■□□□□ 0.25
IRX3P78415 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.6■□□□□ 0.25
IRX3P78415 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.6■□□□□ 0.25
IRX3P78415 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IRX3P78415 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX3P78415 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX3P78415 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX3P78415 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IRX3P78415 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.59■□□□□ 0.25
IRX3P78415 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
IRX3P78415 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
IRX3P78415 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.59■□□□□ 0.25
IRX3P78415 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 PYY2-201ENST00000315776 282 ntBASIC16.59■□□□□ 0.25
IRX3P78415 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
IRX3P78415 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.59■□□□□ 0.25
IRX3P78415 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
IRX3P78415 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.59■□□□□ 0.25
IRX3P78415 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.59■□□□□ 0.25
IRX3P78415 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.59■□□□□ 0.25
IRX3P78415 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX3P78415 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
IRX3P78415 AC007952.4-201ENST00000573866 637 ntBASIC16.59■□□□□ 0.25
IRX3P78415 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.59■□□□□ 0.25
IRX3P78415 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms