Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.25□□□□□ -0.45
AP3S2P59780 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.25□□□□□ -0.45
AP3S2P59780 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.25□□□□□ -0.45
AP3S2P59780 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 AC005014.1-201ENST00000432006 2976 ntBASIC12.25□□□□□ -0.45
AP3S2P59780 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
AP3S2P59780 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
AP3S2P59780 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.25□□□□□ -0.45
AP3S2P59780 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 AL021155.1-201ENST00000438808 2637 ntBASIC12.24□□□□□ -0.45
AP3S2P59780 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
AP3S2P59780 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
AP3S2P59780 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S2P59780 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 HTR5BP-201ENST00000430851 1154 ntBASIC12.24□□□□□ -0.45
AP3S2P59780 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 INE1-201ENST00000456273 945 ntBASIC12.24□□□□□ -0.45
AP3S2P59780 FAM86LP-201ENST00000478302 853 ntBASIC12.24□□□□□ -0.45
AP3S2P59780 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.24□□□□□ -0.45
AP3S2P59780 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.24□□□□□ -0.45
AP3S2P59780 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.24□□□□□ -0.45
AP3S2P59780 AC092865.5-201ENST00000545435 363 ntBASIC12.24□□□□□ -0.45
AP3S2P59780 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S2P59780 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.24□□□□□ -0.45
AP3S2P59780 AC104758.3-203ENST00000562938 2123 ntBASIC12.24□□□□□ -0.45
AP3S2P59780 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
AP3S2P59780 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 AC007431.3-201ENST00000623221 587 ntBASIC12.24□□□□□ -0.45
AP3S2P59780 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
AP3S2P59780 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.24□□□□□ -0.45
AP3S2P59780 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
AP3S2P59780 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
AP3S2P59780 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.24□□□□□ -0.45
AP3S2P59780 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S2P59780 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.24□□□□□ -0.45
AP3S2P59780 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.23□□□□□ -0.45
AP3S2P59780 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.23□□□□□ -0.45
AP3S2P59780 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.23□□□□□ -0.45
AP3S2P59780 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.23□□□□□ -0.45
AP3S2P59780 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
AP3S2P59780 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.23□□□□□ -0.45
AP3S2P59780 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 RNU1-114P-201ENST00000365297 166 ntBASIC12.23□□□□□ -0.45
AP3S2P59780 RN7SKP230-201ENST00000365642 335 ntBASIC12.23□□□□□ -0.45
AP3S2P59780 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
AP3S2P59780 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
AP3S2P59780 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms