Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDN20P56880 AL645939.5-201ENST00000606834 243 ntBASIC13.1□□□□□ -0.31
CLDN20P56880 AC026740.1-201ENST00000607068 791 ntBASIC13.1□□□□□ -0.31
CLDN20P56880 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CLDN20P56880 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CLDN20P56880 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CLDN20P56880 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDN20P56880 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDN20P56880 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CLDN20P56880 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CLDN20P56880 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CLDN20P56880 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 CICP16-201ENST00000502609 2813 ntBASIC13.09□□□□□ -0.31
CLDN20P56880 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 TCAM1P-207ENST00000485295 1537 ntBASIC13.09□□□□□ -0.31
CLDN20P56880 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.09□□□□□ -0.31
CLDN20P56880 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
CLDN20P56880 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDN20P56880 AC011742.3-201ENST00000439053 820 ntBASIC13.09□□□□□ -0.31
CLDN20P56880 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDN20P56880 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 SORD2P-201ENST00000558556 1069 ntBASIC13.09□□□□□ -0.31
CLDN20P56880 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 NDUFV2P1-201ENST00000596415 907 ntBASIC13.09□□□□□ -0.31
CLDN20P56880 AL132994.2-201ENST00000603120 687 ntBASIC13.09□□□□□ -0.31
CLDN20P56880 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.09□□□□□ -0.31
CLDN20P56880 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.09□□□□□ -0.31
CLDN20P56880 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 TUBBP5-203ENST00000508529 1334 ntBASIC13.09□□□□□ -0.31
CLDN20P56880 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN20P56880 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLDN20P56880 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN20P56880 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.08□□□□□ -0.31
CLDN20P56880 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN20P56880 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN20P56880 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN20P56880 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.08□□□□□ -0.31
CLDN20P56880 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN20P56880 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN20P56880 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
CLDN20P56880 AC011498.7-201ENST00000624986 2027 ntBASIC13.08□□□□□ -0.31
CLDN20P56880 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN20P56880 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN20P56880 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms