Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CASP6P55212 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CASP6P55212 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CASP6P55212 AC015688.4-201ENST00000580780 1647 ntBASIC12.87□□□□□ -0.35
CASP6P55212 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
CASP6P55212 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.87□□□□□ -0.35
CASP6P55212 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CASP6P55212 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.87□□□□□ -0.35
CASP6P55212 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CASP6P55212 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
CASP6P55212 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CASP6P55212 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CASP6P55212 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.87□□□□□ -0.35
CASP6P55212 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.87□□□□□ -0.35
CASP6P55212 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CASP6P55212 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CASP6P55212 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CASP6P55212 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.87□□□□□ -0.35
CASP6P55212 AC005089.1-201ENST00000619486 2241 ntBASIC12.86□□□□□ -0.35
CASP6P55212 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CASP6P55212 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.86□□□□□ -0.35
CASP6P55212 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CASP6P55212 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.86□□□□□ -0.35
CASP6P55212 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CASP6P55212 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.86□□□□□ -0.35
CASP6P55212 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.86□□□□□ -0.35
CASP6P55212 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.86□□□□□ -0.35
CASP6P55212 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.86□□□□□ -0.35
CASP6P55212 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.86□□□□□ -0.35
CASP6P55212 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CASP6P55212 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 SSR4P1-203ENST00000599569 2260 ntBASIC12.86□□□□□ -0.35
CASP6P55212 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.86□□□□□ -0.35
CASP6P55212 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.86□□□□□ -0.35
CASP6P55212 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CASP6P55212 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.85□□□□□ -0.35
CASP6P55212 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.85□□□□□ -0.35
CASP6P55212 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.85□□□□□ -0.35
CASP6P55212 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CASP6P55212 AC117489.1-201ENST00000625169 3217 ntBASIC12.85□□□□□ -0.35
CASP6P55212 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CASP6P55212 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CASP6P55212 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.85□□□□□ -0.35
CASP6P55212 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms