Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 AC138028.6-201ENST00000616106 1482 ntBASIC11.68□□□□□ -0.54
CEACAM3P40198 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 AC011700.1-201ENST00000610409 2627 ntBASIC11.68□□□□□ -0.54
CEACAM3P40198 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
CEACAM3P40198 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.67□□□□□ -0.54
CEACAM3P40198 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 AC020907.1-201ENST00000616460 1350 ntBASIC11.67□□□□□ -0.54
CEACAM3P40198 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CEACAM3P40198 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.67□□□□□ -0.54
CEACAM3P40198 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 CES1P1-201ENST00000421606 1704 ntBASIC11.67□□□□□ -0.54
CEACAM3P40198 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
CEACAM3P40198 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 CRCP-204ENST00000398684 492 ntTSL 2 BASIC11.67□□□□□ -0.54
CEACAM3P40198 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CEACAM3P40198 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 TSPY25P-201ENST00000429463 745 ntBASIC11.67□□□□□ -0.54
CEACAM3P40198 NKAIN1P1-201ENST00000435754 582 ntBASIC11.67□□□□□ -0.54
CEACAM3P40198 OR2R1P-201ENST00000441404 914 ntBASIC11.67□□□□□ -0.54
CEACAM3P40198 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 AL512310.5-201ENST00000551999 515 ntBASIC11.67□□□□□ -0.54
CEACAM3P40198 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.67□□□□□ -0.54
CEACAM3P40198 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC11.67□□□□□ -0.54
CEACAM3P40198 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.67□□□□□ -0.54
CEACAM3P40198 MIR4525-201ENST00000580000 75 ntBASIC11.67□□□□□ -0.54
CEACAM3P40198 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.67□□□□□ -0.54
CEACAM3P40198 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.67□□□□□ -0.54
CEACAM3P40198 AC026740.1-201ENST00000607068 791 ntBASIC11.67□□□□□ -0.54
CEACAM3P40198 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC11.67□□□□□ -0.54
CEACAM3P40198 AC091544.8-201ENST00000619490 361 ntBASIC11.67□□□□□ -0.54
CEACAM3P40198 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
CEACAM3P40198 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC11.67□□□□□ -0.54
CEACAM3P40198 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.67□□□□□ -0.54
CEACAM3P40198 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CEACAM3P40198 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CEACAM3P40198 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.67□□□□□ -0.54
CEACAM3P40198 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CEACAM3P40198 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.67□□□□□ -0.54
CEACAM3P40198 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.67□□□□□ -0.54
CEACAM3P40198 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.67□□□□□ -0.54
CEACAM3P40198 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CEACAM3P40198 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CEACAM3P40198 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CEACAM3P40198 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 AL731571.1-201ENST00000617058 5428 ntBASIC11.66□□□□□ -0.54
CEACAM3P40198 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CEACAM3P40198 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms