Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLCN1P35523 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLCN1P35523 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLCN1P35523 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLCN1P35523 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLCN1P35523 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 FLJ30679-201ENST00000624773 1980 ntBASIC16.24■□□□□ 0.19
CLCN1P35523 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN1P35523 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLCN1P35523 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN1P35523 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 PES1-205ENST00000405677 2708 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN1P35523 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLCN1P35523 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLCN1P35523 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN1P35523 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 RNU1-114P-201ENST00000365297 166 ntBASIC16.23■□□□□ 0.19
CLCN1P35523 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN1P35523 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLCN1P35523 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.23■□□□□ 0.19
CLCN1P35523 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN1P35523 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.23■□□□□ 0.19
CLCN1P35523 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CLCN1P35523 DUX4L47-201ENST00000566374 394 ntBASIC16.23■□□□□ 0.19
CLCN1P35523 MIR4745-201ENST00000577608 62 ntBASIC16.23■□□□□ 0.19
CLCN1P35523 AC008494.3-201ENST00000606615 944 ntBASIC16.23■□□□□ 0.19
CLCN1P35523 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
CLCN1P35523 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLCN1P35523 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN1P35523 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN1P35523 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLCN1P35523 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLCN1P35523 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CLCN1P35523 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN1P35523 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLCN1P35523 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLCN1P35523 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCN1P35523 SOCS2P1-201ENST00000417727 557 ntBASIC16.22■□□□□ 0.19
CLCN1P35523 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
CLCN1P35523 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCN1P35523 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.22■□□□□ 0.19
CLCN1P35523 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCN1P35523 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN1P35523 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.22■□□□□ 0.19
CLCN1P35523 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN1P35523 AC133539.2-201ENST00000604757 467 ntBASIC16.22■□□□□ 0.19
CLCN1P35523 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN1P35523 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.22■□□□□ 0.19
CLCN1P35523 AC005252.2-201ENST00000624630 1141 ntBASIC16.22■□□□□ 0.19
CLCN1P35523 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CLCN1P35523 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLCN1P35523 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN1P35523 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.21■□□□□ 0.19
CLCN1P35523 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLCN1P35523 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN1P35523 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms