Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ELL2P1-201ENST00000413990 1906 ntBASIC10.5□□□□□ -0.73
CKS2P33552 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.5□□□□□ -0.73
CKS2P33552 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC10.5□□□□□ -0.73
CKS2P33552 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC10.5□□□□□ -0.73
CKS2P33552 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.5□□□□□ -0.73
CKS2P33552 AC073862.5-201ENST00000624129 2027 ntBASIC10.5□□□□□ -0.73
CKS2P33552 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 AC015819.3-201ENST00000624305 2674 ntBASIC10.5□□□□□ -0.73
CKS2P33552 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC10.5□□□□□ -0.73
CKS2P33552 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.5□□□□□ -0.73
CKS2P33552 AC114812.1-204ENST00000449669 728 ntBASIC10.5□□□□□ -0.73
CKS2P33552 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.5□□□□□ -0.73
CKS2P33552 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.5□□□□□ -0.73
CKS2P33552 RPL13AP25-201ENST00000484130 612 ntBASIC10.5□□□□□ -0.73
CKS2P33552 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.5□□□□□ -0.73
CKS2P33552 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.5□□□□□ -0.73
CKS2P33552 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.5□□□□□ -0.73
CKS2P33552 AC093520.2-201ENST00000561830 333 ntBASIC10.5□□□□□ -0.73
CKS2P33552 AC036164.1-201ENST00000570544 333 ntBASIC10.5□□□□□ -0.73
CKS2P33552 AL049840.4-201ENST00000602422 811 ntBASIC10.5□□□□□ -0.73
CKS2P33552 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC10.5□□□□□ -0.73
CKS2P33552 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 LINC01165-201ENST00000445190 1623 ntBASIC10.5□□□□□ -0.73
CKS2P33552 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
CKS2P33552 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CKS2P33552 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
CKS2P33552 MSNP1-201ENST00000511640 1732 ntBASIC10.5□□□□□ -0.73
CKS2P33552 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 AC015818.9-201ENST00000591705 4582 ntBASIC10.5□□□□□ -0.73
CKS2P33552 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CKS2P33552 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 HERC2P9-206ENST00000529624 5187 ntBASIC10.49□□□□□ -0.73
CKS2P33552 PDIA3P1-201ENST00000471856 1510 ntBASIC10.49□□□□□ -0.73
CKS2P33552 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.49□□□□□ -0.73
CKS2P33552 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 PPP1R26P2-201ENST00000611403 3595 ntBASIC10.49□□□□□ -0.73
CKS2P33552 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC10.49□□□□□ -0.73
CKS2P33552 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 AC008620.2-201ENST00000510294 1569 ntBASIC10.49□□□□□ -0.73
CKS2P33552 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC10.49□□□□□ -0.73
CKS2P33552 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms