Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC17.08■□□□□ 0.32
NCLP19338 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NCLP19338 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NCLP19338 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 MAPK10-262ENST00000641051 5738 ntBASIC17.07■□□□□ 0.32
NCLP19338 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NCLP19338 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.07■□□□□ 0.32
NCLP19338 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.07■□□□□ 0.32
NCLP19338 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.07■□□□□ 0.32
NCLP19338 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 CU634019.7-201ENST00000624153 1185 ntBASIC17.07■□□□□ 0.32
NCLP19338 FP236241.2-201ENST00000624906 1185 ntBASIC17.07■□□□□ 0.32
NCLP19338 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NCLP19338 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NCLP19338 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NCLP19338 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.07■□□□□ 0.32
NCLP19338 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NCLP19338 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.07■□□□□ 0.32
NCLP19338 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC17.07■□□□□ 0.32
NCLP19338 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.07■□□□□ 0.32
NCLP19338 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.07■□□□□ 0.32
NCLP19338 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLP19338 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NCLP19338 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.06■□□□□ 0.32
NCLP19338 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NCLP19338 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCLP19338 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NCLP19338 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC17.06■□□□□ 0.32
NCLP19338 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.06■□□□□ 0.32
NCLP19338 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
NCLP19338 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.06■□□□□ 0.32
NCLP19338 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCLP19338 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 PCDHA6-201ENST00000378126 3267 ntBASIC17.06■□□□□ 0.32
NCLP19338 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NCLP19338 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.06■□□□□ 0.32
NCLP19338 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCLP19338 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NCLP19338 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NCLP19338 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLP19338 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NCLP19338 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC17.05■□□□□ 0.32
NCLP19338 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.05■□□□□ 0.32
NCLP19338 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
NCLP19338 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NCLP19338 LINC00567-201ENST00000569854 3409 ntBASIC17.05■□□□□ 0.32
NCLP19338 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NCLP19338 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 AMT-221ENST00000538581 2038 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLP19338 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLP19338 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NCLP19338 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms