Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.76□□□□□ -0.37
HLA-DOBP13765 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 AC015909.5-201ENST00000624336 2266 ntBASIC12.76□□□□□ -0.37
HLA-DOBP13765 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 KRT18P15-201ENST00000458108 1291 ntBASIC12.76□□□□□ -0.37
HLA-DOBP13765 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 AC013355.1-201ENST00000562625 723 ntBASIC12.76□□□□□ -0.37
HLA-DOBP13765 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 AL132994.2-201ENST00000603120 687 ntBASIC12.76□□□□□ -0.37
HLA-DOBP13765 AL451050.2-201ENST00000606967 682 ntBASIC12.76□□□□□ -0.37
HLA-DOBP13765 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.76□□□□□ -0.37
HLA-DOBP13765 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DOBP13765 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DOBP13765 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.75□□□□□ -0.37
HLA-DOBP13765 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 HMGA1P1-201ENST00000415560 1062 ntBASIC12.75□□□□□ -0.37
HLA-DOBP13765 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 ACTBP11-201ENST00000436287 1126 ntBASIC12.75□□□□□ -0.37
HLA-DOBP13765 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 PFN1P12-201ENST00000455938 534 ntBASIC12.75□□□□□ -0.37
HLA-DOBP13765 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms