Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 Z82244.1-201ENST00000631502 840 ntBASIC23.28■■□□□ 1.32
CFTRP13569 DUX4L33-201ENST00000635217 958 ntBASIC23.28■■□□□ 1.32
CFTRP13569 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC23.28■■□□□ 1.32
CFTRP13569 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFTRP13569 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CFTRP13569 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFTRP13569 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFTRP13569 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CFTRP13569 TBC1D3P1-201ENST00000590047 1693 ntBASIC23.27■■□□□ 1.32
CFTRP13569 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFTRP13569 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC23.27■■□□□ 1.32
CFTRP13569 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC23.27■■□□□ 1.32
CFTRP13569 GBAP1-208ENST00000566701 1546 ntBASIC23.27■■□□□ 1.32
CFTRP13569 NAA10-205ENST00000393712 908 ntTSL 5 BASIC23.27■■□□□ 1.32
CFTRP13569 SERF2-205ENST00000403425 690 ntTSL 2 BASIC23.27■■□□□ 1.32
CFTRP13569 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC23.27■■□□□ 1.32
CFTRP13569 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC23.27■■□□□ 1.32
CFTRP13569 JPT1-205ENST00000470924 663 ntTSL 5 BASIC23.27■■□□□ 1.32
CFTRP13569 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFTRP13569 PDPN-208ENST00000509009 571 ntTSL 4 BASIC23.27■■□□□ 1.32
CFTRP13569 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC23.27■■□□□ 1.32
CFTRP13569 GOLGA2P10-201ENST00000550961 817 ntBASIC23.27■■□□□ 1.32
CFTRP13569 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC23.27■■□□□ 1.32
CFTRP13569 AC022382.1-201ENST00000602768 336 ntBASIC23.27■■□□□ 1.32
CFTRP13569 AL033381.2-201ENST00000603854 732 ntBASIC23.27■■□□□ 1.32
CFTRP13569 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC23.27■■□□□ 1.32
CFTRP13569 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC23.27■■□□□ 1.32
CFTRP13569 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFTRP13569 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
CFTRP13569 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFTRP13569 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFTRP13569 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFTRP13569 CD9-212ENST00000610354 1315 ntTSL 5 BASIC23.27■■□□□ 1.31
CFTRP13569 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFTRP13569 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CFTRP13569 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC23.26■■□□□ 1.31
CFTRP13569 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFTRP13569 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
CFTRP13569 AC092384.3-202ENST00000564646 2873 ntBASIC23.26■■□□□ 1.31
CFTRP13569 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CFTRP13569 AC008267.3-201ENST00000448776 712 ntBASIC23.26■■□□□ 1.31
CFTRP13569 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CFTRP13569 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC23.26■■□□□ 1.31
CFTRP13569 MIR4309-201ENST00000582498 83 ntBASIC23.26■■□□□ 1.31
CFTRP13569 AC117500.5-201ENST00000623233 527 ntBASIC23.26■■□□□ 1.31
CFTRP13569 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC23.26■■□□□ 1.31
CFTRP13569 DDC-212ENST00000615193 1674 ntTSL 3 BASIC23.26■■□□□ 1.31
CFTRP13569 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC23.26■■□□□ 1.31
CFTRP13569 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFTRP13569 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
CFTRP13569 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CFTRP13569 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC23.26■■□□□ 1.31
CFTRP13569 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 PGAM1P10-201ENST00000402426 761 ntBASIC23.25■■□□□ 1.31
CFTRP13569 HMGN1P4-201ENST00000419500 290 ntBASIC23.25■■□□□ 1.31
CFTRP13569 Z84721.1-201ENST00000438841 372 ntBASIC23.25■■□□□ 1.31
CFTRP13569 HNRNPA1P72-201ENST00000529511 967 ntBASIC23.25■■□□□ 1.31
CFTRP13569 DERL2-206ENST00000572834 589 ntTSL 3 BASIC23.25■■□□□ 1.31
CFTRP13569 AC015818.3-201ENST00000583797 589 ntBASIC23.25■■□□□ 1.31
CFTRP13569 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC23.25■■□□□ 1.31
CFTRP13569 AC010601.2-201ENST00000623060 774 ntBASIC23.25■■□□□ 1.31
CFTRP13569 AC126177.1-201ENST00000547829 2218 ntBASIC23.25■■□□□ 1.31
CFTRP13569 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC23.25■■□□□ 1.31
CFTRP13569 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CFTRP13569 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC23.24■■□□□ 1.31
CFTRP13569 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CFTRP13569 AL627095.1-201ENST00000414775 321 ntBASIC23.24■■□□□ 1.31
CFTRP13569 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC23.24■■□□□ 1.31
CFTRP13569 CLK2P1-201ENST00000416636 1294 ntBASIC23.24■■□□□ 1.31
CFTRP13569 GAPDHP29-201ENST00000429913 985 ntBASIC23.24■■□□□ 1.31
CFTRP13569 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC23.24■■□□□ 1.31
CFTRP13569 AKR1C6P-201ENST00000432950 983 ntBASIC23.24■■□□□ 1.31
CFTRP13569 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 PLAC9P1-203ENST00000440031 223 ntBASIC23.24■■□□□ 1.31
CFTRP13569 CXXC1P1-202ENST00000489409 1212 ntBASIC23.24■■□□□ 1.31
CFTRP13569 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC23.24■■□□□ 1.31
CFTRP13569 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC23.24■■□□□ 1.31
CFTRP13569 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 IMPDH1P5-201ENST00000439688 1540 ntBASIC23.24■■□□□ 1.31
CFTRP13569 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CFTRP13569 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC23.24■■□□□ 1.31
CFTRP13569 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CFTRP13569 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CFTRP13569 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFTRP13569 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms