Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 AC005586.2-201ENST00000563946 837 ntBASIC15.6■□□□□ 0.09
PNMA6AP0CW24 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 AC009955.4-201ENST00000597192 544 ntBASIC15.6■□□□□ 0.09
PNMA6AP0CW24 AC008687.7-202ENST00000637404 953 ntBASIC15.6■□□□□ 0.09
PNMA6AP0CW24 POM121L14P-201ENST00000406100 1558 ntBASIC15.6■□□□□ 0.09
PNMA6AP0CW24 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.6■□□□□ 0.09
PNMA6AP0CW24 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 ACA64.2-201ENST00000459014 129 ntBASIC15.59■□□□□ 0.09
PNMA6AP0CW24 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 AC106886.1-201ENST00000568660 600 ntBASIC15.59■□□□□ 0.09
PNMA6AP0CW24 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 MIR4259-201ENST00000584466 101 ntBASIC15.59■□□□□ 0.09
PNMA6AP0CW24 AC104506.1-201ENST00000609247 429 ntBASIC15.59■□□□□ 0.09
PNMA6AP0CW24 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PNMA6AP0CW24 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PNMA6AP0CW24 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 HLA-V-201ENST00000429037 534 ntBASIC15.58■□□□□ 0.08
PNMA6AP0CW24 AL157407.1-201ENST00000435784 904 ntBASIC15.58■□□□□ 0.08
PNMA6AP0CW24 AL035414.1-201ENST00000451327 857 ntBASIC15.58■□□□□ 0.08
PNMA6AP0CW24 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 AC104989.1-201ENST00000519711 778 ntBASIC15.58■□□□□ 0.08
PNMA6AP0CW24 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 DUX4L46-201ENST00000566845 751 ntBASIC15.58■□□□□ 0.08
PNMA6AP0CW24 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 AC008825.2-201ENST00000603374 718 ntBASIC15.58■□□□□ 0.08
PNMA6AP0CW24 MIR6720-201ENST00000611664 98 ntBASIC15.58■□□□□ 0.08
PNMA6AP0CW24 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.58■□□□□ 0.08
PNMA6AP0CW24 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms