Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
APOC3P02656 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
APOC3P02656 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
APOC3P02656 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
APOC3P02656 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 YBX1P2-201ENST00000489612 999 ntBASIC11.33□□□□□ -0.6
APOC3P02656 RNA5SP410-201ENST00000516285 106 ntBASIC11.33□□□□□ -0.6
APOC3P02656 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.33□□□□□ -0.6
APOC3P02656 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.33□□□□□ -0.6
APOC3P02656 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
APOC3P02656 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.33□□□□□ -0.6
APOC3P02656 FAM90A17P-201ENST00000533716 1957 ntBASIC11.33□□□□□ -0.6
APOC3P02656 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 ABR-201ENST00000291107 2673 ntTSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
APOC3P02656 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.33□□□□□ -0.6
APOC3P02656 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.33□□□□□ -0.6
APOC3P02656 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC3P02656 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
APOC3P02656 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
APOC3P02656 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
APOC3P02656 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 AC091181.1-201ENST00000623762 2098 ntBASIC11.32□□□□□ -0.6
APOC3P02656 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 AL445647.1-201ENST00000606221 3599 ntBASIC11.32□□□□□ -0.6
APOC3P02656 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 MED24-203ENST00000394127 3456 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC3P02656 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
APOC3P02656 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC3P02656 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
APOC3P02656 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC3P02656 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.32□□□□□ -0.6
APOC3P02656 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 AL513480.1-201ENST00000451731 511 ntBASIC11.32□□□□□ -0.6
APOC3P02656 HOMER2P1-201ENST00000455653 964 ntBASIC11.32□□□□□ -0.6
APOC3P02656 AC092647.4-201ENST00000457211 535 ntBASIC11.32□□□□□ -0.6
APOC3P02656 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.32□□□□□ -0.6
APOC3P02656 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.32□□□□□ -0.6
APOC3P02656 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.32□□□□□ -0.6
APOC3P02656 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.32□□□□□ -0.6
APOC3P02656 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC3P02656 AC069148.1-201ENST00000608741 768 ntBASIC11.32□□□□□ -0.6
APOC3P02656 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
APOC3P02656 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 AL162615.1-201ENST00000429893 1653 ntBASIC11.32□□□□□ -0.6
APOC3P02656 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 GOLGA8CP-201ENST00000446144 5237 ntBASIC11.32□□□□□ -0.6
APOC3P02656 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
APOC3P02656 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC3P02656 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms