Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 AC004554.1-201ENST00000422830 1468 ntBASIC12.72□□□□□ -0.37
ZIC3O60481 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.72□□□□□ -0.37
ZIC3O60481 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ZIC3O60481 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 HLA-DMA-203ENST00000395305 777 ntBASIC12.72□□□□□ -0.37
ZIC3O60481 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ZIC3O60481 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.72□□□□□ -0.37
ZIC3O60481 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.72□□□□□ -0.37
ZIC3O60481 AC098934.1-203ENST00000442868 1262 ntBASIC12.72□□□□□ -0.37
ZIC3O60481 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.72□□□□□ -0.37
ZIC3O60481 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 ORAOV1P1-201ENST00000503108 395 ntBASIC12.72□□□□□ -0.37
ZIC3O60481 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.72□□□□□ -0.37
ZIC3O60481 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.72□□□□□ -0.37
ZIC3O60481 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.72□□□□□ -0.37
ZIC3O60481 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.72□□□□□ -0.37
ZIC3O60481 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.72□□□□□ -0.37
ZIC3O60481 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.72□□□□□ -0.37
ZIC3O60481 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.72□□□□□ -0.37
ZIC3O60481 SIGLEC22P-201ENST00000599104 714 ntBASIC12.72□□□□□ -0.37
ZIC3O60481 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.72□□□□□ -0.37
ZIC3O60481 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.72□□□□□ -0.37
ZIC3O60481 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.72□□□□□ -0.37
ZIC3O60481 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
ZIC3O60481 AC009145.4-201ENST00000625119 1294 ntBASIC12.72□□□□□ -0.37
ZIC3O60481 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZIC3O60481 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.72□□□□□ -0.37
ZIC3O60481 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ZIC3O60481 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.71□□□□□ -0.37
ZIC3O60481 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.71□□□□□ -0.37
ZIC3O60481 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ZIC3O60481 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 AC074138.1-201ENST00000611182 1303 ntBASIC12.71□□□□□ -0.37
ZIC3O60481 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ZIC3O60481 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.71□□□□□ -0.37
ZIC3O60481 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 AL512306.1-201ENST00000432698 848 ntBASIC12.71□□□□□ -0.37
ZIC3O60481 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ZIC3O60481 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.71□□□□□ -0.37
ZIC3O60481 SCARNA12-201ENST00000459155 270 ntBASIC12.71□□□□□ -0.37
ZIC3O60481 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.71□□□□□ -0.37
ZIC3O60481 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZIC3O60481 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms