Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AP000346.4-201ENST00000614827 381 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 AL096828.3-201ENST00000615354 462 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AC068760.1-201ENST00000493579 1953 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 AC004899.1-201ENST00000424687 1714 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 AC061965.1-201ENST00000560524 1465 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 SHMT1P1-201ENST00000419974 1312 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 MIR658-201ENST00000385210 100 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 MIR663B-201ENST00000408361 115 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 Z93015.1-201ENST00000451718 390 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 BNIP3P42-201ENST00000454982 569 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 RNA5SP412-201ENST00000516234 123 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 RN7SL560P-201ENST00000577943 264 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 BNIP3P29-201ENST00000598302 571 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 BNIP3P13-201ENST00000599968 566 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 AC011447.5-201ENST00000616168 564 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 AC022748.3-201ENST00000621828 275 ntBASIC11.46□□□□□ -0.57
SRRM4A7MD48 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SRRM4A7MD48 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.46□□□□□ -0.57
SRRM4A7MD48 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SRRM4A7MD48 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 MEX3B-202ENST00000558133 4333 ntBASIC11.46□□□□□ -0.58
SRRM4A7MD48 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SRRM4A7MD48 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 AC087386.2-201ENST00000623212 4637 ntBASIC11.46□□□□□ -0.58
SRRM4A7MD48 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SRRM4A7MD48 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SRRM4A7MD48 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SRRM4A7MD48 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SRRM4A7MD48 AC027612.1-201ENST00000445234 2395 ntBASIC11.46□□□□□ -0.58
SRRM4A7MD48 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SRRM4A7MD48 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SRRM4A7MD48 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.58
SRRM4A7MD48 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.46□□□□□ -0.58
SRRM4A7MD48 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SRRM4A7MD48 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.45□□□□□ -0.58
SRRM4A7MD48 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms