Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC073957.3-201ENST00000609998 6758 ntBASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AC113367.3-201ENST00000508316 1912 ntBASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AC012362.1-201ENST00000434906 739 ntBASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AC004837.1-201ENST00000446267 564 ntBASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AL512310.5-201ENST00000551999 515 ntBASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AC025262.2-201ENST00000623975 1056 ntBASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AL161773.1-201ENST00000624845 863 ntBASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 STRCP1-201ENST00000509801 5328 ntBASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 PYY2-201ENST00000315776 282 ntBASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 AC018638.5-201ENST00000450885 754 ntBASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 SCARNA12-201ENST00000459155 270 ntBASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 NDUFB10P1-201ENST00000567319 521 ntBASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 MIR6858-201ENST00000620733 67 ntBASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 AC009084.3-201ENST00000623356 437 ntBASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.42■□□□□ 0.22
CTDP1Q9Y5B0 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms