Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 AL354877.1-201ENST00000424412 413 ntBASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 AC012441.2-201ENST00000444843 739 ntBASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 AL160314.3-201ENST00000556041 767 ntBASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 HILS1-202ENST00000545329 423 ntBASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 DUX4L45-201ENST00000566406 1057 ntBASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 EEF1DP1-201ENST00000585891 896 ntBASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 AL035252.4-201ENST00000624174 288 ntBASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 CCT8L1P-201ENST00000465400 1674 ntBASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 AC131212.3-201ENST00000624087 4219 ntBASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF11Q9Y3C5 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms