Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.07■□□□□ 0
ATP2A3Q93084 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.07■□□□□ 0
ATP2A3Q93084 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.07■□□□□ 0
ATP2A3Q93084 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.07■□□□□ 0
ATP2A3Q93084 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.07■□□□□ 0
ATP2A3Q93084 MIR3188-201ENST00000583494 85 ntBASIC15.07■□□□□ 0
ATP2A3Q93084 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.07■□□□□ 0
ATP2A3Q93084 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.07■□□□□ 0
ATP2A3Q93084 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.07■□□□□ 0
ATP2A3Q93084 MIR6769A-201ENST00000617340 73 ntBASIC15.07■□□□□ 0
ATP2A3Q93084 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.07■□□□□ 0
ATP2A3Q93084 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
ATP2A3Q93084 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ATP2A3Q93084 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.07■□□□□ 0
ATP2A3Q93084 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.07■□□□□ 0
ATP2A3Q93084 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.07■□□□□ 0
ATP2A3Q93084 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.07■□□□□ 0
ATP2A3Q93084 TMBIM7P-202ENST00000641474 1516 ntBASIC15.07■□□□□ 0
ATP2A3Q93084 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP2A3Q93084 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ATP2A3Q93084 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.06■□□□□ 0
ATP2A3Q93084 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.06■□□□□ 0
ATP2A3Q93084 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
ATP2A3Q93084 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.06■□□□□ 0
ATP2A3Q93084 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
ATP2A3Q93084 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.06■□□□□ 0
ATP2A3Q93084 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.06■□□□□ 0
ATP2A3Q93084 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ATP2A3Q93084 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.06■□□□□ 0
ATP2A3Q93084 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ATP2A3Q93084 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.06■□□□□ 0
ATP2A3Q93084 LINC01783-202ENST00000614408 828 ntBASIC15.06■□□□□ 0
ATP2A3Q93084 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.06■□□□□ 0
ATP2A3Q93084 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.06■□□□□ 0
ATP2A3Q93084 BX284668.2-205ENST00000619677 828 ntBASIC15.06■□□□□ 0
ATP2A3Q93084 AC051619.9-201ENST00000623237 597 ntBASIC15.06■□□□□ 0
ATP2A3Q93084 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.06■□□□□ 0
ATP2A3Q93084 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.06■□□□□ 0
ATP2A3Q93084 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ATP2A3Q93084 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.06■□□□□ 0
ATP2A3Q93084 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.06■□□□□ 0
ATP2A3Q93084 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
ATP2A3Q93084 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ATP2A3Q93084 AL590440.2-201ENST00000641973 1595 ntBASIC15.06■□□□□ 0
ATP2A3Q93084 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ATP2A3Q93084 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.06■□□□□ 0
ATP2A3Q93084 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ATP2A3Q93084 AGGF1P1-201ENST00000509500 2073 ntBASIC15.05■□□□□ 0
ATP2A3Q93084 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.05■□□□□ 0
ATP2A3Q93084 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ATP2A3Q93084 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.05■□□□□ 0
ATP2A3Q93084 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.05■□□□□ 0
ATP2A3Q93084 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.05■□□□□ 0
ATP2A3Q93084 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.05■□□□□ 0
ATP2A3Q93084 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ATP2A3Q93084 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.05■□□□□ 0
ATP2A3Q93084 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
ATP2A3Q93084 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
ATP2A3Q93084 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.05■□□□□ 0
ATP2A3Q93084 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
ATP2A3Q93084 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.05■□□□□ -0
ATP2A3Q93084 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.05■□□□□ -0
ATP2A3Q93084 AC026320.2-201ENST00000434379 478 ntBASIC15.05■□□□□ -0
ATP2A3Q93084 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.05■□□□□ -0
ATP2A3Q93084 AC069218.1-201ENST00000435269 762 ntBASIC15.05■□□□□ -0
ATP2A3Q93084 FGFR3P1-201ENST00000449999 601 ntBASIC15.05■□□□□ -0
ATP2A3Q93084 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.05■□□□□ -0
ATP2A3Q93084 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms