Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 AL021578.1-201ENST00000613646 709 ntBASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 C8orf49-201ENST00000525043 1968 ntBASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 KRT8P21-201ENST00000430398 1491 ntBASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 AL133466.1-201ENST00000447582 150 ntBASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 CU633904.3-201ENST00000624042 1029 ntBASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 AC138627.1-207ENST00000641560 1006 ntBASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 AC020658.7-201ENST00000624274 2442 ntBASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 LINC00115-201ENST00000473798 1317 ntBASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMARCC2Q8TAQ2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 AC005252.3-201ENST00000623855 2258 ntBASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 AC012618.1-201ENST00000461223 412 ntBASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 AGAP12P-201ENST00000585227 2359 ntBASIC16.61■□□□□ 0.25
SMARCC2Q8TAQ2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms