Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.65□□□□□ -0.39
LINC00346Q8IVM7 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.65□□□□□ -0.39
LINC00346Q8IVM7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00346Q8IVM7 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 CCT8L1P-201ENST00000465400 1674 ntBASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 AL354877.1-201ENST00000424412 413 ntBASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 AC012441.2-201ENST00000444843 739 ntBASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 AC006122.1-201ENST00000493323 440 ntBASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 AL160314.3-201ENST00000556041 767 ntBASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 AL445209.1-201ENST00000607269 3491 ntBASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00346Q8IVM7 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 PPT1-213ENST00000641319 2388 ntBASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 AC005562.1-201ENST00000583030 3219 ntBASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 AC009542.2-202ENST00000619004 1067 ntBASIC12.63□□□□□ -0.39
LINC00346Q8IVM7 AC133540.1-201ENST00000620845 1019 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms