Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 CICP8-201ENST00000455800 2813 ntBASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 AC007952.5-201ENST00000572818 1486 ntBASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 AL512430.1-201ENST00000392575 860 ntBASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 ORAOV1P1-201ENST00000503108 395 ntBASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H3F3CQ6NXT2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 AC015802.1-201ENST00000588104 1449 ntBASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H3F3CQ6NXT2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms