Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 AL008638.4-201ENST00000624792 1315 ntBASIC17.47■□□□□ 0.39
RC3H1Q5TC82 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 AC093462.1-201ENST00000621167 1683 ntBASIC17.46■□□□□ 0.39
RC3H1Q5TC82 PTN-202ENST00000393083 1599 ntTSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 SDCBP2P1-201ENST00000416115 614 ntBASIC17.46■□□□□ 0.39
RC3H1Q5TC82 AC098657.1-201ENST00000416270 1135 ntBASIC17.46■□□□□ 0.39
RC3H1Q5TC82 MAGEA7P-201ENST00000436482 942 ntBASIC17.46■□□□□ 0.39
RC3H1Q5TC82 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 AC099328.1-201ENST00000498809 1030 ntBASIC17.46■□□□□ 0.39
RC3H1Q5TC82 OR4A49P-201ENST00000527050 632 ntBASIC17.46■□□□□ 0.39
RC3H1Q5TC82 AP000920.1-201ENST00000531824 344 ntBASIC17.46■□□□□ 0.39
RC3H1Q5TC82 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 MIR3940-201ENST00000579148 102 ntBASIC17.46■□□□□ 0.39
RC3H1Q5TC82 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.46■□□□□ 0.39
RC3H1Q5TC82 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.46■□□□□ 0.38
RC3H1Q5TC82 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.46■□□□□ 0.38
RC3H1Q5TC82 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RC3H1Q5TC82 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.46■□□□□ 0.38
RC3H1Q5TC82 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 U73169.1-201ENST00000395152 367 ntBASIC17.45■□□□□ 0.38
RC3H1Q5TC82 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 DPY19L2P4-201ENST00000479881 442 ntBASIC17.45■□□□□ 0.38
RC3H1Q5TC82 MARK2P17-201ENST00000498560 841 ntBASIC17.45■□□□□ 0.38
RC3H1Q5TC82 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 IGHVII-74-1-201ENST00000517572 241 ntBASIC17.45■□□□□ 0.38
RC3H1Q5TC82 LY6E-215ENST00000523847 427 ntTSL 3 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 RN7SL134P-201ENST00000579756 303 ntBASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AC089987.1-201ENST00000551654 2209 ntBASIC17.45■□□□□ 0.38
RC3H1Q5TC82 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AC015802.1-201ENST00000588104 1449 ntBASIC17.45■□□□□ 0.38
RC3H1Q5TC82 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RC3H1Q5TC82 AC132872.4-202ENST00000622924 2756 ntBASIC17.45■□□□□ 0.38
RC3H1Q5TC82 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms