Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 AL021155.1-201ENST00000438808 2637 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 AC236430.1-201ENST00000402231 743 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 MESTP3-201ENST00000503460 968 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 DOC2GP-202ENST00000514950 1163 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RN7SL204P-201ENST00000582831 262 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ANKRD55Q3KP44 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC027369.3-201ENST00000530465 3707 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 DFFBP1-201ENST00000433250 979 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 INE1-201ENST00000456273 945 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC023310.3-201ENST00000557027 670 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC100756.1-201ENST00000562736 682 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC138749.3-201ENST00000567691 622 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC124283.3-201ENST00000570869 594 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms