Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 MIR770-201ENST00000390219 98 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 TUBB2BP1-201ENST00000404155 871 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 MIR1202-201ENST00000408529 83 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 PMS2P2-201ENST00000425039 1128 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 OR2R1P-201ENST00000441404 914 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 AC007551.1-201ENST00000457394 519 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.67□□□□□ -0.38
EFNB1P98172 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 AC233724.13-201ENST00000598383 410 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 AC009884.2-201ENST00000603110 324 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 AL022328.1-201ENST00000610050 478 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
EFNB1P98172 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
EFNB1P98172 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB1P98172 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
EFNB1P98172 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
EFNB1P98172 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB1P98172 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB1P98172 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB1P98172 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.66□□□□□ -0.38
EFNB1P98172 FAM58BP-201ENST00000439056 645 ntBASIC12.66□□□□□ -0.38
EFNB1P98172 AC012441.2-201ENST00000444843 739 ntBASIC12.66□□□□□ -0.38
EFNB1P98172 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
EFNB1P98172 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 AC006122.1-201ENST00000493323 440 ntBASIC12.66□□□□□ -0.38
EFNB1P98172 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
EFNB1P98172 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.66□□□□□ -0.38
EFNB1P98172 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.66□□□□□ -0.38
EFNB1P98172 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.66□□□□□ -0.38
EFNB1P98172 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB1P98172 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB1P98172 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB1P98172 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
EFNB1P98172 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
EFNB1P98172 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB1P98172 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 AC118758.2-201ENST00000614242 2813 ntBASIC12.66□□□□□ -0.38
EFNB1P98172 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB1P98172 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
EFNB1P98172 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB1P98172 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB1P98172 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
EFNB1P98172 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms