Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
IRX4P78413 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
IRX4P78413 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.94□□□□□ -0.02
IRX4P78413 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 AL136309.1-201ENST00000403917 691 ntBASIC14.94□□□□□ -0.02
IRX4P78413 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.94□□□□□ -0.02
IRX4P78413 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.94□□□□□ -0.02
IRX4P78413 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.94□□□□□ -0.02
IRX4P78413 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.94□□□□□ -0.02
IRX4P78413 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.94□□□□□ -0.02
IRX4P78413 AC022616.1-201ENST00000518688 554 ntBASIC14.94□□□□□ -0.02
IRX4P78413 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.94□□□□□ -0.02
IRX4P78413 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.94□□□□□ -0.02
IRX4P78413 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.94□□□□□ -0.02
IRX4P78413 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
IRX4P78413 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.94□□□□□ -0.02
IRX4P78413 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
IRX4P78413 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IRX4P78413 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.93□□□□□ -0.02
IRX4P78413 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 AL157791.1-201ENST00000553667 1699 ntBASIC14.93□□□□□ -0.02
IRX4P78413 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.93□□□□□ -0.02
IRX4P78413 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.93□□□□□ -0.02
IRX4P78413 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
IRX4P78413 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
IRX4P78413 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
IRX4P78413 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 AGGF1P1-201ENST00000509500 2073 ntBASIC14.93□□□□□ -0.02
IRX4P78413 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
IRX4P78413 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.93□□□□□ -0.02
IRX4P78413 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.93□□□□□ -0.02
IRX4P78413 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
IRX4P78413 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.93□□□□□ -0.02
IRX4P78413 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.93□□□□□ -0.02
IRX4P78413 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.93□□□□□ -0.02
IRX4P78413 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 CICP17-201ENST00000418553 2377 ntBASIC14.93□□□□□ -0.02
IRX4P78413 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
IRX4P78413 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
IRX4P78413 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.93□□□□□ -0.02
IRX4P78413 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.93□□□□□ -0.02
IRX4P78413 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IRX4P78413 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
IRX4P78413 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms