Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.78□□□□□ -0.04
ERVFC1P60507 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.78□□□□□ -0.04
ERVFC1P60507 IFNWP2-201ENST00000431203 580 ntBASIC14.78□□□□□ -0.04
ERVFC1P60507 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.78□□□□□ -0.04
ERVFC1P60507 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ERVFC1P60507 AC025594.1-201ENST00000469533 543 ntBASIC14.78□□□□□ -0.04
ERVFC1P60507 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC14.78□□□□□ -0.04
ERVFC1P60507 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.78□□□□□ -0.04
ERVFC1P60507 COQ10BP2-201ENST00000513804 724 ntBASIC14.78□□□□□ -0.04
ERVFC1P60507 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.78□□□□□ -0.04
ERVFC1P60507 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.78□□□□□ -0.04
ERVFC1P60507 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.78□□□□□ -0.04
ERVFC1P60507 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ERVFC1P60507 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ERVFC1P60507 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ERVFC1P60507 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 AC090505.1-201ENST00000430515 1834 ntBASIC14.78□□□□□ -0.04
ERVFC1P60507 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERVFC1P60507 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.77□□□□□ -0.04
ERVFC1P60507 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERVFC1P60507 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERVFC1P60507 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERVFC1P60507 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERVFC1P60507 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERVFC1P60507 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERVFC1P60507 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
ERVFC1P60507 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERVFC1P60507 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ERVFC1P60507 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.77□□□□□ -0.04
ERVFC1P60507 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.77□□□□□ -0.04
ERVFC1P60507 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERVFC1P60507 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERVFC1P60507 NHP2P1-201ENST00000335274 462 ntBASIC14.77□□□□□ -0.05
ERVFC1P60507 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERVFC1P60507 MIR1307-201ENST00000408840 149 ntBASIC14.77□□□□□ -0.05
ERVFC1P60507 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.77□□□□□ -0.05
ERVFC1P60507 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERVFC1P60507 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.77□□□□□ -0.05
ERVFC1P60507 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.77□□□□□ -0.05
ERVFC1P60507 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ERVFC1P60507 TPT1P11-201ENST00000458482 498 ntBASIC14.77□□□□□ -0.05
ERVFC1P60507 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
ERVFC1P60507 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.77□□□□□ -0.05
ERVFC1P60507 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.77□□□□□ -0.05
ERVFC1P60507 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.77□□□□□ -0.05
ERVFC1P60507 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.77□□□□□ -0.05
ERVFC1P60507 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
ERVFC1P60507 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.77□□□□□ -0.05
ERVFC1P60507 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERVFC1P60507 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERVFC1P60507 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.77□□□□□ -0.05
ERVFC1P60507 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.77□□□□□ -0.05
ERVFC1P60507 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.77□□□□□ -0.05
ERVFC1P60507 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.77□□□□□ -0.05
ERVFC1P60507 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERVFC1P60507 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.77□□□□□ -0.05
ERVFC1P60507 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.77□□□□□ -0.05
ERVFC1P60507 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.77□□□□□ -0.05
ERVFC1P60507 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ERVFC1P60507 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.77□□□□□ -0.05
ERVFC1P60507 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.76□□□□□ -0.05
ERVFC1P60507 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.76□□□□□ -0.05
ERVFC1P60507 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.76□□□□□ -0.05
ERVFC1P60507 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.76□□□□□ -0.05
ERVFC1P60507 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.76□□□□□ -0.05
ERVFC1P60507 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERVFC1P60507 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ERVFC1P60507 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ERVFC1P60507 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.76□□□□□ -0.05
ERVFC1P60507 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms