Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 FKBP4P6-201ENST00000457486 1332 ntBASIC11.91□□□□□ -0.5
RIPPLY3P57055 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AC244394.1-201ENST00000435000 1665 ntBASIC11.91□□□□□ -0.5
RIPPLY3P57055 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 CICP23-201ENST00000605013 2741 ntBASIC11.91□□□□□ -0.5
RIPPLY3P57055 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AC104961.1-201ENST00000427605 771 ntBASIC11.91□□□□□ -0.5
RIPPLY3P57055 ASS1P2-201ENST00000439895 1223 ntBASIC11.91□□□□□ -0.5
RIPPLY3P57055 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AC147876.1-201ENST00000504408 322 ntBASIC11.91□□□□□ -0.5
RIPPLY3P57055 RPL30-213ENST00000523172 274 ntTSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ABCC6P1-203ENST00000565566 1170 ntBASIC11.91□□□□□ -0.5
RIPPLY3P57055 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.91□□□□□ -0.5
RIPPLY3P57055 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RIPPLY3P57055 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms