Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDN17P56750 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLDN17P56750 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDN17P56750 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 LINC00115-201ENST00000473798 1317 ntBASIC12.73□□□□□ -0.37
CLDN17P56750 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 RN7SKP214-201ENST00000364208 315 ntBASIC12.73□□□□□ -0.37
CLDN17P56750 HMGA1P1-201ENST00000415560 1062 ntBASIC12.73□□□□□ -0.37
CLDN17P56750 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 RN7SL277P-201ENST00000481521 288 ntBASIC12.73□□□□□ -0.37
CLDN17P56750 AC091804.1-201ENST00000486888 567 ntBASIC12.73□□□□□ -0.37
CLDN17P56750 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.73□□□□□ -0.37
CLDN17P56750 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN17P56750 AC020914.3-201ENST00000594712 304 ntBASIC12.73□□□□□ -0.37
CLDN17P56750 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.73□□□□□ -0.37
CLDN17P56750 AC026740.1-201ENST00000607068 791 ntBASIC12.73□□□□□ -0.37
CLDN17P56750 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDN17P56750 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 AC010327.5-201ENST00000586923 3061 ntBASIC12.73□□□□□ -0.37
CLDN17P56750 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLDN17P56750 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLDN17P56750 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLDN17P56750 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN17P56750 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN17P56750 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLDN17P56750 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN17P56750 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLDN17P56750 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN17P56750 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 AC111170.3-201ENST00000624282 2464 ntBASIC12.72□□□□□ -0.37
CLDN17P56750 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 KRT8P21-201ENST00000430398 1491 ntBASIC12.72□□□□□ -0.37
CLDN17P56750 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN17P56750 BEND3P1-201ENST00000421591 1944 ntBASIC12.72□□□□□ -0.37
CLDN17P56750 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CLDN17P56750 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN17P56750 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 AL590824.1-201ENST00000403828 1349 ntBASIC12.72□□□□□ -0.37
CLDN17P56750 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN17P56750 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLDN17P56750 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.72□□□□□ -0.37
CLDN17P56750 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 KRT18P15-201ENST00000458108 1291 ntBASIC12.72□□□□□ -0.37
CLDN17P56750 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN17P56750 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CLDN17P56750 AL805961.1-203ENST00000641078 1258 ntBASIC12.72□□□□□ -0.37
CLDN17P56750 NAP1L6-202ENST00000641404 1222 ntBASIC12.72□□□□□ -0.37
CLDN17P56750 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN17P56750 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CLDN17P56750 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN17P56750 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN17P56750 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms