Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 KRT17P5-201ENST00000332088 839 ntBASIC10.6□□□□□ -0.71
CMC4P56277 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 LINC00265-2P-201ENST00000413372 782 ntBASIC10.6□□□□□ -0.71
CMC4P56277 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC10.6□□□□□ -0.71
CMC4P56277 DUTP3-201ENST00000450025 415 ntBASIC10.6□□□□□ -0.71
CMC4P56277 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 HIST2H2BC-201ENST00000498492 580 ntBASIC10.6□□□□□ -0.71
CMC4P56277 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC10.6□□□□□ -0.71
CMC4P56277 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 CMC2-204ENST00000562713 573 ntTSL 3 BASIC10.6□□□□□ -0.71
CMC4P56277 STUB1-204ENST00000564370 875 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC10.6□□□□□ -0.71
CMC4P56277 CMC2-209ENST00000565108 399 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
CMC4P56277 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC10.6□□□□□ -0.71
CMC4P56277 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
CMC4P56277 AL353770.1-201ENST00000614915 403 ntBASIC10.6□□□□□ -0.71
CMC4P56277 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC10.6□□□□□ -0.71
CMC4P56277 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 AC138627.1-207ENST00000641560 1006 ntBASIC10.6□□□□□ -0.71
CMC4P56277 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC10.6□□□□□ -0.71
CMC4P56277 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.6□□□□□ -0.71
CMC4P56277 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
CMC4P56277 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 DUT-208ENST00000559540 1441 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 MARK2P16-201ENST00000605714 1723 ntBASIC10.59□□□□□ -0.71
CMC4P56277 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
CMC4P56277 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
CMC4P56277 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 DNAJB1P1-201ENST00000429417 1024 ntBASIC10.59□□□□□ -0.71
CMC4P56277 AC098934.1-203ENST00000442868 1262 ntBASIC10.59□□□□□ -0.71
CMC4P56277 MAGEA5-201ENST00000446757 942 ntBASIC10.59□□□□□ -0.71
CMC4P56277 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.59□□□□□ -0.71
CMC4P56277 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 NEU3-202ENST00000526068 431 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
CMC4P56277 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
CMC4P56277 TPM1-223ENST00000560445 485 ntTSL 3 BASIC10.59□□□□□ -0.71
CMC4P56277 PHBP15-201ENST00000574228 665 ntBASIC10.59□□□□□ -0.71
CMC4P56277 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC10.59□□□□□ -0.71
CMC4P56277 NAT9-211ENST00000580632 799 ntTSL 3 BASIC10.59□□□□□ -0.71
CMC4P56277 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC10.59□□□□□ -0.71
CMC4P56277 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 BAP1-211ENST00000615113 489 ntBASIC10.59□□□□□ -0.71
CMC4P56277 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC10.59□□□□□ -0.71
CMC4P56277 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms