Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.84□□□□□ -0.35
SUMO3P55854 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 SLC25A15P3-201ENST00000505530 290 ntBASIC12.84□□□□□ -0.35
SUMO3P55854 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 ALG1L13P-202ENST00000519320 584 ntBASIC12.84□□□□□ -0.35
SUMO3P55854 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.84□□□□□ -0.35
SUMO3P55854 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.84□□□□□ -0.35
SUMO3P55854 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.84□□□□□ -0.35
SUMO3P55854 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.84□□□□□ -0.35
SUMO3P55854 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.84□□□□□ -0.35
SUMO3P55854 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.84□□□□□ -0.35
SUMO3P55854 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SUMO3P55854 ST20-AS1-201ENST00000560255 4223 ntBASIC12.83□□□□□ -0.35
SUMO3P55854 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.83□□□□□ -0.35
SUMO3P55854 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SUMO3P55854 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.83□□□□□ -0.35
SUMO3P55854 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.83□□□□□ -0.35
SUMO3P55854 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SUMO3P55854 AL133338.1-201ENST00000565695 1517 ntBASIC12.83□□□□□ -0.35
SUMO3P55854 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 FAM90A2P-201ENST00000511144 1395 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 FAM90A25P-201ENST00000528404 1395 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 MARK2P16-201ENST00000605714 1723 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.83□□□□□ -0.36
SUMO3P55854 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 AC026320.2-201ENST00000434379 478 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.83□□□□□ -0.36
SUMO3P55854 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.83□□□□□ -0.36
SUMO3P55854 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.83□□□□□ -0.36
SUMO3P55854 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.83□□□□□ -0.36
SUMO3P55854 AC012618.1-201ENST00000461223 412 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.83□□□□□ -0.36
SUMO3P55854 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.83□□□□□ -0.36
SUMO3P55854 ACTG1P17-201ENST00000558391 1119 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.83□□□□□ -0.36
SUMO3P55854 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 AL133467.4-201ENST00000602953 725 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 AL109837.1-201ENST00000603272 613 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 AL353770.1-201ENST00000614915 403 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.83□□□□□ -0.36
SUMO3P55854 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SUMO3P55854 AC138627.1-207ENST00000641560 1006 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 AC111170.3-201ENST00000624282 2464 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.83□□□□□ -0.36
SUMO3P55854 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SUMO3P55854 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SUMO3P55854 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.82□□□□□ -0.36
SUMO3P55854 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms