Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.02□□□□□ -0.33
SSR4P51571 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSR4P51571 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.02□□□□□ -0.33
SSR4P51571 AC006372.4-201ENST00000624122 1543 ntBASIC13.02□□□□□ -0.33
SSR4P51571 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSR4P51571 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSR4P51571 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSR4P51571 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SSR4P51571 AL139158.3-201ENST00000641212 1562 ntBASIC13.02□□□□□ -0.33
SSR4P51571 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSR4P51571 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SSR4P51571 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSR4P51571 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
SSR4P51571 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SSR4P51571 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSR4P51571 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
SSR4P51571 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.02□□□□□ -0.33
SSR4P51571 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SSR4P51571 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 AC152010.1-201ENST00000415779 2006 ntBASIC13.01□□□□□ -0.33
SSR4P51571 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR4P51571 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSR4P51571 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.01□□□□□ -0.33
SSR4P51571 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSR4P51571 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR4P51571 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SSR4P51571 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SSR4P51571 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSR4P51571 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SSR4P51571 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SSR4P51571 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.01□□□□□ -0.33
SSR4P51571 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.01□□□□□ -0.33
SSR4P51571 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 RPS2P36-201ENST00000456516 831 ntBASIC13.01□□□□□ -0.33
SSR4P51571 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.01□□□□□ -0.33
SSR4P51571 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.01□□□□□ -0.33
SSR4P51571 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR4P51571 AC145285.5-201ENST00000562217 361 ntBASIC13.01□□□□□ -0.33
SSR4P51571 MIR4706-201ENST00000582134 82 ntBASIC13.01□□□□□ -0.33
SSR4P51571 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.01□□□□□ -0.33
SSR4P51571 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
SSR4P51571 AC092171.5-201ENST00000608012 942 ntBASIC13.01□□□□□ -0.33
SSR4P51571 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR4P51571 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.01□□□□□ -0.33
SSR4P51571 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.01□□□□□ -0.33
SSR4P51571 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR4P51571 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SSR4P51571 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13□□□□□ -0.33
SSR4P51571 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SSR4P51571 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13□□□□□ -0.33
SSR4P51571 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13□□□□□ -0.33
SSR4P51571 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13□□□□□ -0.33
SSR4P51571 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13□□□□□ -0.33
SSR4P51571 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR4P51571 HLA-DMA-203ENST00000395305 777 ntBASIC13□□□□□ -0.33
SSR4P51571 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13□□□□□ -0.33
SSR4P51571 LINC00265-2P-201ENST00000413372 782 ntBASIC13□□□□□ -0.33
SSR4P51571 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13□□□□□ -0.33
SSR4P51571 PPP1R2P4-201ENST00000424051 595 ntBASIC13□□□□□ -0.33
SSR4P51571 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13□□□□□ -0.33
SSR4P51571 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SSR4P51571 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13□□□□□ -0.33
SSR4P51571 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms