Protein–RNA interactions for Protein: P26358

DNMT1, DNA (cytosine-5)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 1,616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1P26358 RPSAP12-201ENST00000435879 888 ntBASIC20.6■□□□□ 0.89
DNMT1P26358 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
DNMT1P26358 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC20.6■□□□□ 0.89
DNMT1P26358 AP000920.1-201ENST00000531824 344 ntBASIC20.6■□□□□ 0.89
DNMT1P26358 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC20.6■□□□□ 0.89
DNMT1P26358 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC20.6■□□□□ 0.89
DNMT1P26358 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC20.6■□□□□ 0.89
DNMT1P26358 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.6■□□□□ 0.89
DNMT1P26358 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DNMT1P26358 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC20.59■□□□□ 0.89
DNMT1P26358 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DNMT1P26358 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.59■□□□□ 0.89
DNMT1P26358 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC20.59■□□□□ 0.89
DNMT1P26358 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
DNMT1P26358 AC020763.3-201ENST00000625095 2904 ntBASIC20.59■□□□□ 0.89
DNMT1P26358 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
DNMT1P26358 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC20.59■□□□□ 0.89
DNMT1P26358 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
DNMT1P26358 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 AC136604.1-202ENST00000425471 771 ntBASIC20.59■□□□□ 0.89
DNMT1P26358 CD37-203ENST00000426897 1204 ntTSL 2 BASIC20.59■□□□□ 0.89
DNMT1P26358 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
DNMT1P26358 AC025594.1-201ENST00000469533 543 ntBASIC20.59■□□□□ 0.89
DNMT1P26358 RNA5SP420-201ENST00000516997 137 ntBASIC20.59■□□□□ 0.89
DNMT1P26358 SAA2-206ENST00000530400 323 ntTSL 3 BASIC20.59■□□□□ 0.89
DNMT1P26358 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
DNMT1P26358 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC20.59■□□□□ 0.89
DNMT1P26358 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
DNMT1P26358 OR6D1P-202ENST00000641007 5290 ntBASIC20.59■□□□□ 0.89
DNMT1P26358 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT1P26358 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DNMT1P26358 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC20.59■□□□□ 0.89
DNMT1P26358 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
DNMT1P26358 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC20.59■□□□□ 0.89
DNMT1P26358 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC20.59■□□□□ 0.89
DNMT1P26358 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC20.59■□□□□ 0.89
DNMT1P26358 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT1P26358 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT1P26358 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC20.58■□□□□ 0.89
DNMT1P26358 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DNMT1P26358 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT1P26358 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC20.58■□□□□ 0.89
DNMT1P26358 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
DNMT1P26358 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT1P26358 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DNMT1P26358 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC20.58■□□□□ 0.89
DNMT1P26358 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT1P26358 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT1P26358 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT1P26358 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
DNMT1P26358 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC20.58■□□□□ 0.89
DNMT1P26358 GPX3-202ENST00000517973 612 ntTSL 3 BASIC20.58■□□□□ 0.89
DNMT1P26358 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC20.58■□□□□ 0.89
DNMT1P26358 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC20.58■□□□□ 0.89
DNMT1P26358 AC004466.2-201ENST00000614749 516 ntBASIC20.58■□□□□ 0.89
DNMT1P26358 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT1P26358 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DNMT1P26358 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
DNMT1P26358 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DNMT1P26358 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
DNMT1P26358 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
DNMT1P26358 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 RPL14-203ENST00000416518 812 ntTSL 3 BASIC20.57■□□□□ 0.88
DNMT1P26358 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC20.57■□□□□ 0.88
DNMT1P26358 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC20.57■□□□□ 0.88
DNMT1P26358 HNRNPA1P16-201ENST00000575692 955 ntBASIC20.57■□□□□ 0.88
DNMT1P26358 KRT8P34-201ENST00000577607 1044 ntBASIC20.57■□□□□ 0.88
DNMT1P26358 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC20.57■□□□□ 0.88
DNMT1P26358 PRMT1P1-201ENST00000604252 1009 ntBASIC20.57■□□□□ 0.88
DNMT1P26358 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC20.57■□□□□ 0.88
DNMT1P26358 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC20.57■□□□□ 0.88
DNMT1P26358 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
DNMT1P26358 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT1P26358 AC027601.5-201ENST00000624065 2482 ntBASIC20.57■□□□□ 0.88
DNMT1P26358 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms