Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 TMBIM7P-202ENST00000641474 1516 ntBASIC12.11□□□□□ -0.47
HIST1H1DP16402 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 AC108024.1-201ENST00000626286 1721 ntBASIC12.11□□□□□ -0.47
HIST1H1DP16402 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 AL136309.1-201ENST00000403917 691 ntBASIC12.11□□□□□ -0.47
HIST1H1DP16402 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 AC010141.1-201ENST00000411585 623 ntBASIC12.11□□□□□ -0.47
HIST1H1DP16402 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 AC023511.2-201ENST00000618803 211 ntBASIC12.11□□□□□ -0.47
HIST1H1DP16402 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1DP16402 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1DP16402 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 LINC00567-201ENST00000569854 3409 ntBASIC12.1□□□□□ -0.47
HIST1H1DP16402 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 AC007952.5-201ENST00000572818 1486 ntBASIC12.1□□□□□ -0.47
HIST1H1DP16402 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 AC026271.4-201ENST00000578214 1833 ntBASIC12.1□□□□□ -0.47
HIST1H1DP16402 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 HMGA1P1-201ENST00000415560 1062 ntBASIC12.1□□□□□ -0.47
HIST1H1DP16402 AL355864.2-201ENST00000447420 863 ntBASIC12.1□□□□□ -0.47
HIST1H1DP16402 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 AL590640.2-201ENST00000457038 527 ntBASIC12.1□□□□□ -0.47
HIST1H1DP16402 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 AC140912.1-201ENST00000577171 1054 ntBASIC12.1□□□□□ -0.47
HIST1H1DP16402 GNRHR2-203ENST00000581100 1187 ntBASIC12.1□□□□□ -0.47
HIST1H1DP16402 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 RN7SL713P-201ENST00000582127 302 ntBASIC12.1□□□□□ -0.47
HIST1H1DP16402 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1DP16402 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.1□□□□□ -0.47
HIST1H1DP16402 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms